Atomistry » Magnesium » PDB 2ppq-2q0e » 2pry
Atomistry »
  Magnesium »
    PDB 2ppq-2q0e »
      2pry »

Magnesium in PDB 2pry: Apo Form of S. Cerevisiae Orotate Phosphoribosyltransferase

Enzymatic activity of Apo Form of S. Cerevisiae Orotate Phosphoribosyltransferase

All present enzymatic activity of Apo Form of S. Cerevisiae Orotate Phosphoribosyltransferase:
2.4.2.10;

Protein crystallography data

The structure of Apo Form of S. Cerevisiae Orotate Phosphoribosyltransferase, PDB code: 2pry was solved by L.Gonzalez-Segura, T.D.Hurley, R.W.Mcclard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.92 / 2.35
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 59.791, 59.791, 135.595, 90.00, 90.00, 90.00
R / Rfree (%) 23.8 / 26

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Apo Form of S. Cerevisiae Orotate Phosphoribosyltransferase (pdb code 2pry). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Apo Form of S. Cerevisiae Orotate Phosphoribosyltransferase, PDB code: 2pry:

Magnesium binding site 1 out of 1 in 2pry

Go back to Magnesium Binding Sites List in 2pry
Magnesium binding site 1 out of 1 in the Apo Form of S. Cerevisiae Orotate Phosphoribosyltransferase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Apo Form of S. Cerevisiae Orotate Phosphoribosyltransferase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg226

b:61.8
occ:1.00
O A:HOH230 2.2 46.6 1.0
O A:HOH266 2.2 64.7 1.0
OD1 A:ASP64 4.1 42.3 1.0
OD2 A:ASP64 4.2 43.8 1.0
O A:GLN62 4.3 43.0 1.0
CG A:ASP64 4.6 43.4 1.0
CA A:GLN62 4.8 41.8 1.0
C A:GLN62 5.0 42.5 1.0

Reference:

L.Gonzalez-Segura, J.F.Witte, R.W.Mcclard, T.D.Hurley. Ternary Complex Formation and Induced Asymmetry in Orotate Phosphoribosyltransferase. Biochemistry V. 46 14075 2007.
ISSN: ISSN 0006-2960
PubMed: 18020427
DOI: 10.1021/BI701023Z
Page generated: Wed Aug 14 02:15:41 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy