Magnesium in PDB 2pzk: Crystal Structure of the Bordetella Bronchiseptica Enzyme Wbmg in Complex with Nad

The structure of Crystal Structure of the Bordetella Bronchiseptica Enzyme Wbmg in Complex with Nad, PDB code: 2pzk was solved by J.D.King, N.J.Harmer, D.J.Maskell, T.L.Blundell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.83 / 2.10
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	192.041, 49.760, 76.023, 90.00, 101.13, 90.00
R / Rfree (%)	18.5 / 24.2

The binding sites of Magnesium atom in the Crystal Structure of the Bordetella Bronchiseptica Enzyme Wbmg in Complex with Nad (pdb code 2pzk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Bordetella Bronchiseptica Enzyme Wbmg in Complex with Nad, PDB code: 2pzk:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Bordetella Bronchiseptica Enzyme Wbmg in Complex with Nad


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Bordetella Bronchiseptica Enzyme Wbmg in Complex with Nad within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:62.5 occ:1.00 OH A:TYR140 3.5 32.2 1.0 CZ A:TYR79 4.0 30.5 1.0 CE2 A:TYR79 4.1 30.2 1.0 CE1 A:TYR79 4.2 29.8 1.0 O1N A:NAD401 4.3 26.1 1.0 CD2 A:TYR79 4.3 31.6 1.0 CZ A:TYR140 4.3 29.9 1.0 O3 A:NAD401 4.4 24.9 1.0 CE2 A:TYR140 4.4 29.0 1.0 OH A:TYR79 4.4 33.3 1.0 CD1 A:TYR79 4.5 30.5 1.0 CG A:TYR79 4.5 30.2 1.0 O A:HOH643 4.7 41.1 1.0 C2N A:NAD401 4.8 26.7 1.0 O5D A:NAD401 4.8 24.0 1.0 C2D A:NAD401 4.8 26.6 1.0 PN A:NAD401 4.8 25.9 1.0 C3N A:NAD401 4.9 27.2 1.0 O2D A:NAD401 5.0 24.0 1.0

J.D.King, N.J.Harmer, A.Preston, C.M.Palmer, M.Rejzek, R.A.Field, T.L.Blundell, D.J.Maskell. Predicting Protein Function From Structure--the Roles of Short-Chain Dehydrogenase/Reductase Enzymes in Bordetella O-Antigen Biosynthesis. J.Mol.Biol. V. 374 749 2007.
ISSN: ISSN 0022-2836
PubMed: 17950751
DOI: 10.1016/J.JMB.2007.09.055