Magnesium in PDB 2q3h: The Crystal Structure of Rhoua in the Gdp-Bound State.

The structure of The Crystal Structure of Rhoua in the Gdp-Bound State., PDB code: 2q3h was solved by C.Gileadi, X.Yang, E.Papagrigoriou, J.Elkins, Y.Zhao, J.Bray, O.Gileadi, C.Umeano, E.Ugochukwu, J.Uppenberg, G.Bunkoczi, F.Von Delft, A.C.W.Pike, C.Phillips, P.Savitsky, O.Fedorov, A.Edwards, J.Weigelt, C.H.Arrowsmith, M.Sundstrom, D.A.Doyle, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.46 / 1.73
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	82.068, 53.600, 54.128, 90.00, 118.80, 90.00
R / Rfree (%)	18.3 / 22.2

The binding sites of Magnesium atom in the The Crystal Structure of Rhoua in the Gdp-Bound State. (pdb code 2q3h). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structure of Rhoua in the Gdp-Bound State., PDB code: 2q3h:

Magnesium binding site 1 out of 1 in the The Crystal Structure of Rhoua in the Gdp-Bound State.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of Rhoua in the Gdp-Bound State. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1 b:40.1 occ:1.00 O A:HOH3499 1.6 34.9 1.0 O A:HOH3500 1.7 42.0 1.0 OG1 A:THR63 2.0 41.5 1.0 O A:HOH3504 2.1 43.1 1.0 O2B A:GDP3444 2.2 37.0 1.0 O A:HOH3501 2.3 40.7 1.0 CB A:THR63 3.0 46.1 1.0 PB A:GDP3444 3.4 37.4 1.0 O3B A:GDP3444 3.5 40.0 1.0 O1A A:GDP3444 3.8 42.3 1.0 CG2 A:THR63 4.0 46.6 1.0 OD2 A:ASP103 4.1 51.4 1.0 N A:THR63 4.1 43.3 1.0 CA A:THR63 4.1 44.8 1.0 O A:HOH3562 4.1 55.2 1.0 O3A A:GDP3444 4.2 32.4 1.0 PA A:GDP3444 4.3 36.8 1.0 O2A A:GDP3444 4.4 39.2 1.0 O1B A:GDP3444 4.5 33.4 1.0 O A:HOH3503 4.5 45.3 1.0 OD1 A:ASP103 4.7 44.2 1.0 O A:THR81 4.8 72.6 1.0 CG A:ASP103 4.8 38.0 1.0

C.Gileadi, X.Yang, E.Papagrigoriou, J.Elkins, Y.Zhao, J.Bray, O.Gileadi, C.Umeano, E.Ugochukwu, J.Uppenberg, G.Bunkoczi, F.Von Delft, A.C.W.Pike, C.Phillips, P.Savitsky, O.Fedorov, A.Edwards, J.Weigelt, C.H.Arrowsmith, M.Sundstrom, D.A.Doyle. The Crystal Structure of Rhoua in the Gdp-Bound State. To Be Published.