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Magnesium in PDB 2q3p: Ensemble Refinement of the Protein Crystal Structure of AT3G17210 From Arabidopsis Thaliana

Protein crystallography data

The structure of Ensemble Refinement of the Protein Crystal Structure of AT3G17210 From Arabidopsis Thaliana, PDB code: 2q3p was solved by E.J.Levin, D.A.Kondrashov, G.E.Wesenberg, G.N.Phillips Jr., Center Foreukaryotic Structural Genomics (Cesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.99 / 1.90
Space group P 62
Cell size a, b, c (Å), α, β, γ (°) 55.468, 55.468, 57.673, 90.00, 90.00, 120.00
R / Rfree (%) 18.2 / 22.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Ensemble Refinement of the Protein Crystal Structure of AT3G17210 From Arabidopsis Thaliana (pdb code 2q3p). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Ensemble Refinement of the Protein Crystal Structure of AT3G17210 From Arabidopsis Thaliana, PDB code: 2q3p:

Magnesium binding site 1 out of 1 in 2q3p

Go back to Magnesium Binding Sites List in 2q3p
Magnesium binding site 1 out of 1 in the Ensemble Refinement of the Protein Crystal Structure of AT3G17210 From Arabidopsis Thaliana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ensemble Refinement of the Protein Crystal Structure of AT3G17210 From Arabidopsis Thaliana within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg901

b:27.6
occ:0.25
O A:HOH902 2.3 34.5 0.2
O A:MSE45 2.5 23.7 0.2
O A:VAL39 2.6 23.1 0.2
O A:ILE42 2.6 23.1 0.2
O A:HOH903 2.6 31.7 0.2
O A:GLU43 2.8 25.1 0.2
C A:GLU43 3.3 25.0 0.2
C A:MSE45 3.4 21.0 0.2
CA A:GLU43 3.4 26.2 0.2
C A:ILE42 3.5 25.2 0.2
C A:VAL39 3.6 22.8 0.2
O A:HOH997 3.8 42.9 0.2
N A:GLU43 3.9 24.6 0.2
N A:MSE45 4.0 21.9 0.2
CG1 A:VAL39 4.1 23.1 0.2
CA A:VAL39 4.2 24.4 0.2
CA A:MSE45 4.2 21.6 0.2
N A:LYS46 4.2 20.9 0.2
CA A:LYS46 4.4 20.6 0.2
N A:PRO44 4.4 24.2 0.2
O A:HOH939 4.6 31.2 0.2
C A:PRO44 4.6 24.3 0.2
CB A:MSE45 4.7 19.9 0.2
CA A:ILE42 4.7 24.1 0.2
N A:ASN40 4.8 24.6 0.2
O A:LYS46 4.8 16.6 0.2
CB A:VAL39 4.8 21.4 0.2
OE2 A:GLU43 4.8 25.9 0.2
CB A:GLU43 4.8 25.6 0.2
NZ A:LYS46 4.9 23.8 0.2
CD A:GLU43 4.9 25.4 0.2
N A:ILE42 4.9 24.8 0.2
O A:LEU38 5.0 24.8 0.2

Reference:

E.J.Levin, D.A.Kondrashov, G.E.Wesenberg, G.N.Phillips. Ensemble Refinement of Protein Crystal Structures: Validation and Application. Structure V. 15 1040 2007.
ISSN: ISSN 0969-2126
PubMed: 17850744
DOI: 10.1016/J.STR.2007.06.019
Page generated: Wed Aug 14 02:35:26 2024

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