Magnesium in PDB 2q5z: Crystal Structure of Imazg From Vibrio Dat 722: Ntag-Imazg (P43212)

All present enzymatic activity of Crystal Structure of Imazg From Vibrio Dat 722: Ntag-Imazg (P43212):
3.6.1.19;

The structure of Crystal Structure of Imazg From Vibrio Dat 722: Ntag-Imazg (P43212), PDB code: 2q5z was solved by A.Robinson, A.P.Guilfoyle, S.J.Harrop, Y.Boucher, H.W.Stokes, P.M.G.Curmi, B.C.Mabbutt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	17.17 / 2.30
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	63.333, 63.333, 163.227, 90.00, 90.00, 90.00
R / Rfree (%)	17.9 / 20.7

The binding sites of Magnesium atom in the Crystal Structure of Imazg From Vibrio Dat 722: Ntag-Imazg (P43212) (pdb code 2q5z). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Imazg From Vibrio Dat 722: Ntag-Imazg (P43212), PDB code: 2q5z:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Imazg From Vibrio Dat 722: Ntag-Imazg (P43212)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Imazg From Vibrio Dat 722: Ntag-Imazg (P43212) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:46.4 occ:1.00 OE1 A:GLU30 2.3 41.5 1.0 OE1 A:GLU33 2.3 42.4 1.0 OE1 A:GLU58 2.4 41.6 1.0 OD2 A:ASP61 2.4 40.0 1.0 O A:HOH611 2.6 36.7 1.0 O A:HOH608 2.7 31.8 1.0 CD A:GLU58 3.4 40.6 1.0 CG A:ASP61 3.4 39.6 1.0 CD A:GLU33 3.4 41.5 1.0 CD A:GLU30 3.5 43.6 1.0 O A:HOH610 3.5 44.2 1.0 OE2 A:GLU58 3.7 42.0 1.0 CB A:ASP61 3.8 37.9 1.0 OE2 A:GLU30 4.0 50.2 1.0 CB A:GLU33 4.1 38.0 1.0 OE2 A:GLU33 4.2 47.7 1.0 CG A:GLU33 4.3 39.5 1.0 OD1 A:ASP61 4.5 40.6 1.0 CG A:GLU30 4.7 38.7 1.0 OE1 A:GLU57 4.7 45.7 1.0 CG A:GLU58 4.8 39.1 1.0 CA A:GLU58 4.8 38.5 1.0 CG A:GLU57 4.8 41.2 1.0 CB A:GLU30 4.9 38.3 1.0 CA A:GLU30 4.9 37.9 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Imazg From Vibrio Dat 722: Ntag-Imazg (P43212)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Imazg From Vibrio Dat 722: Ntag-Imazg (P43212) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg502 b:49.5 occ:1.00 OE1 B:GLU58 2.2 42.5 1.0 OE1 B:GLU33 2.2 43.1 1.0 OE1 B:GLU30 2.3 42.9 1.0 OD2 B:ASP61 2.4 38.0 1.0 O B:HOH543 2.7 37.6 1.0 O B:HOH548 2.8 42.0 1.0 CD B:GLU58 3.2 40.9 1.0 CD B:GLU33 3.4 40.7 1.0 CD B:GLU30 3.4 44.4 1.0 CG B:ASP61 3.5 38.8 1.0 OE2 B:GLU58 3.5 43.3 1.0 CB B:ASP61 3.8 37.8 1.0 OE2 B:GLU30 3.9 51.4 1.0 O B:HOH556 4.0 53.7 1.0 CB B:GLU33 4.1 38.0 1.0 OE2 B:GLU33 4.1 46.3 1.0 O B:HOH521 4.3 35.5 1.0 CG B:GLU33 4.3 38.1 1.0 O B:HOH554 4.5 46.2 1.0 OD1 B:ASP61 4.6 38.0 1.0 CG B:GLU58 4.6 38.4 1.0 CG B:GLU30 4.7 40.5 1.0 CA B:GLU58 4.7 37.9 1.0 CB B:GLU30 4.8 38.3 1.0 OE1 B:GLU57 4.9 49.0 1.0 CA B:GLU30 4.9 38.1 1.0 CG B:GLU57 4.9 42.2 1.0 CB B:GLU58 4.9 38.3 1.0

A.Robinson, A.P.Guilfoyle, S.J.Harrop, Y.Boucher, H.W.Stokes, P.M.Curmi, B.C.Mabbutt. A Putative House-Cleaning Enzyme Encoded Within An Integron Array: 1.8 A Crystal Structure Defines A New Mazg Subtype. Mol.Microbiol. V. 66 610 2007.
ISSN: ISSN 0950-382X
PubMed: 17892463
DOI: 10.1111/J.1365-2958.2007.05932.X