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Magnesium in PDB 2qen: The Walker-Type Atpase PABY2304 of Pyrococcus Abyssi

Protein crystallography data

The structure of The Walker-Type Atpase PABY2304 of Pyrococcus Abyssi, PDB code: 2qen was solved by M.Uhring, G.Bey, O.Lecompte, D.Moras, O.Poch, J.Cavarelli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.30 / 2.25
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 80.614, 49.195, 108.863, 90.00, 98.10, 90.00
R / Rfree (%) 19.7 / 24.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Walker-Type Atpase PABY2304 of Pyrococcus Abyssi (pdb code 2qen). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Walker-Type Atpase PABY2304 of Pyrococcus Abyssi, PDB code: 2qen:

Magnesium binding site 1 out of 1 in 2qen

Go back to Magnesium Binding Sites List in 2qen
Magnesium binding site 1 out of 1 in the The Walker-Type Atpase PABY2304 of Pyrococcus Abyssi


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Walker-Type Atpase PABY2304 of Pyrococcus Abyssi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg910

b:33.9
occ:1.00
O A:HOH1010 2.1 23.6 1.0
O A:HOH1008 2.1 21.8 1.0
O A:HOH1007 2.2 21.9 1.0
O2B A:ADP999 2.2 25.8 1.0
O A:HOH1004 2.2 19.0 1.0
OG A:SER45 2.3 27.7 1.0
CB A:SER45 3.3 26.7 1.0
PB A:ADP999 3.3 25.3 1.0
O3B A:ADP999 3.5 26.3 1.0
OE2 A:GLU136 3.7 32.7 1.0
OD2 A:ASP135 3.9 35.7 1.0
OD1 A:ASP135 3.9 33.2 1.0
N A:SER45 3.9 26.3 1.0
O A:HOH1037 4.1 28.9 1.0
CA A:SER45 4.1 26.1 1.0
CG A:ASP135 4.2 32.7 1.0
O A:HOH1080 4.2 35.4 1.0
O A:HOH1065 4.3 34.2 1.0
O3A A:ADP999 4.3 26.1 1.0
O2A A:ADP999 4.4 22.8 1.0
O1B A:ADP999 4.4 26.1 1.0
CG A:GLU136 4.6 29.7 1.0
CD A:GLU136 4.6 31.8 1.0
PA A:ADP999 4.7 26.6 1.0
O1A A:ADP999 4.9 25.2 1.0

Reference:

M.Uhring, G.Bey, O.Lecompte, D.Moras, O.Poch, J.Cavarelli. The Walker-Type Atpase PABY2304 of Pyrococcus Abyssi To Be Published.
Page generated: Wed Aug 14 02:42:31 2024

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