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Magnesium in PDB 2qoq: Human EPHA3 Kinase and Juxtamembrane Region, Base, Amp-Pnp Bound Structure

Enzymatic activity of Human EPHA3 Kinase and Juxtamembrane Region, Base, Amp-Pnp Bound Structure

All present enzymatic activity of Human EPHA3 Kinase and Juxtamembrane Region, Base, Amp-Pnp Bound Structure:
2.7.10.1;

Protein crystallography data

The structure of Human EPHA3 Kinase and Juxtamembrane Region, Base, Amp-Pnp Bound Structure, PDB code: 2qoq was solved by T.Davis, J.R.Walker, E.M.Newman, F.Mackenzie, C.Butler-Cole, J.Weigelt, M.Sundstrom, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, S.Dhe-Paganon, P.Loppnau, A.Allali-Hassani, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.83 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 54.043, 38.324, 76.514, 90.00, 102.33, 90.00
R / Rfree (%) 18.9 / 21.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human EPHA3 Kinase and Juxtamembrane Region, Base, Amp-Pnp Bound Structure (pdb code 2qoq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human EPHA3 Kinase and Juxtamembrane Region, Base, Amp-Pnp Bound Structure, PDB code: 2qoq:

Magnesium binding site 1 out of 1 in 2qoq

Go back to Magnesium Binding Sites List in 2qoq
Magnesium binding site 1 out of 1 in the Human EPHA3 Kinase and Juxtamembrane Region, Base, Amp-Pnp Bound Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human EPHA3 Kinase and Juxtamembrane Region, Base, Amp-Pnp Bound Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1

b:59.6
occ:1.00
O A:HOH1190 1.9 47.2 1.0
O2B A:ANP948 2.1 39.6 1.0
O1A A:ANP948 2.3 35.6 1.0
O3G A:ANP948 2.4 40.2 1.0
O A:HOH1150 3.2 31.7 1.0
PB A:ANP948 3.3 37.4 0.5
PA A:ANP948 3.4 36.5 1.0
OD1 A:ASN751 3.5 18.1 1.0
PG A:ANP948 3.7 38.4 0.5
O3A A:ANP948 3.7 37.1 0.5
N3B A:ANP948 3.9 38.4 1.0
O A:ARG750 4.0 16.5 1.0
O2A A:ANP948 4.0 36.9 1.0
O A:HOH1080 4.2 26.4 1.0
O1G A:ANP948 4.3 40.4 1.0
O1B A:ANP948 4.6 39.3 1.0
O A:HOH1081 4.6 27.9 1.0
O5' A:ANP948 4.7 35.4 1.0
CG A:ASN751 4.7 16.2 1.0
O2G A:ANP948 4.9 37.4 1.0
C A:ARG750 4.9 15.3 1.0

Reference:

T.L.Davis, J.R.Walker, P.Loppnau, C.Butler-Cole, A.Allali-Hassani, S.Dhe-Paganon. Autoregulation By the Juxtamembrane Region of the Human Ephrin Receptor Tyrosine Kinase A3 (EPHA3). Structure V. 16 873 2008.
ISSN: ISSN 0969-2126
PubMed: 18547520
DOI: 10.1016/J.STR.2008.03.008
Page generated: Sun Aug 10 13:25:15 2025

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