Magnesium in PDB 2qth: Crystal Structure of A Gtp-Binding Protein From the Hyperthermophilic Archaeon Sulfolobus Solfataricus in Complex with Gdp

The structure of Crystal Structure of A Gtp-Binding Protein From the Hyperthermophilic Archaeon Sulfolobus Solfataricus in Complex with Gdp, PDB code: 2qth was solved by H.Wu, L.Sun, S.J.Brouns, S.Fu, Z.Rao, J.Van Der Oost, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.30 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	64.991, 72.403, 96.016, 90.00, 90.00, 90.00
R / Rfree (%)	22.4 / 26.4

The structure of Crystal Structure of A Gtp-Binding Protein From the Hyperthermophilic Archaeon Sulfolobus Solfataricus in Complex with Gdp also contains other interesting chemical elements:

Cadmium

(Cd)

4 atoms

The binding sites of Magnesium atom in the Crystal Structure of A Gtp-Binding Protein From the Hyperthermophilic Archaeon Sulfolobus Solfataricus in Complex with Gdp (pdb code 2qth). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Gtp-Binding Protein From the Hyperthermophilic Archaeon Sulfolobus Solfataricus in Complex with Gdp, PDB code: 2qth:

Magnesium binding site 1 out of 1 in the Crystal Structure of A Gtp-Binding Protein From the Hyperthermophilic Archaeon Sulfolobus Solfataricus in Complex with Gdp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Gtp-Binding Protein From the Hyperthermophilic Archaeon Sulfolobus Solfataricus in Complex with Gdp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:40.5 occ:1.00 OG1 A:THR193 2.1 28.8 1.0 O A:HOH608 2.2 40.2 1.0 O3B A:GDP500 2.3 34.9 1.0 CB A:THR193 3.1 31.5 1.0 O2A A:GDP500 3.1 53.9 1.0 O1B A:GDP500 3.3 32.2 1.0 O A:HOH543 3.4 37.0 1.0 PB A:GDP500 3.4 30.6 1.0 O A:HOH560 3.5 39.7 1.0 O A:HOH584 4.1 35.1 1.0 CG2 A:THR193 4.1 29.2 1.0 PA A:GDP500 4.1 48.6 1.0 N A:THR193 4.1 28.4 1.0 O3A A:GDP500 4.2 40.0 1.0 CA A:THR193 4.2 29.7 1.0 CA A:GLY22 4.4 29.0 1.0 O A:ALA18 4.5 31.0 1.0 N A:GLY22 4.5 28.9 1.0 O2B A:GDP500 4.6 26.8 1.0 CD A:CD402 4.6 32.7 1.0 O1A A:GDP500 4.7 41.3 1.0

H.Wu, L.Sun, S.J.Brouns, S.Fu, J.Akerboom, X.Li, C.Zhang, Z.Rao, J.Van Der Oost. Crystal Structure of A Gtp-Binding Protein From the Hyperthermophilic Archaeon Sulfolobus Solfataricus. To Be Published.