Atomistry » Magnesium » PDB 2rex-2uxd » 2rgc
Atomistry »
  Magnesium »
    PDB 2rex-2uxd »
      2rgc »

Magnesium in PDB 2rgc: Crystal Structure of H-RASQ61V-Gppnhp

Protein crystallography data

The structure of Crystal Structure of H-RASQ61V-Gppnhp, PDB code: 2rgc was solved by G.Buhrman, G.Wink, C.Mattos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.28 / 1.60
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 88.430, 88.430, 132.690, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 21.3

Other elements in 2rgc:

The structure of Crystal Structure of H-RASQ61V-Gppnhp also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of H-RASQ61V-Gppnhp (pdb code 2rgc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of H-RASQ61V-Gppnhp, PDB code: 2rgc:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2rgc

Go back to Magnesium Binding Sites List in 2rgc
Magnesium binding site 1 out of 2 in the Crystal Structure of H-RASQ61V-Gppnhp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of H-RASQ61V-Gppnhp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:17.8
occ:1.00
O A:HOH636 2.0 17.8 1.0
OG A:SER17 2.1 16.5 1.0
OG1 A:THR35 2.1 18.0 1.0
O A:HOH635 2.1 17.8 1.0
O2G A:GNP528 2.1 17.7 1.0
O2B A:GNP528 2.2 16.6 1.0
CB A:THR35 3.0 19.0 1.0
CB A:SER17 3.2 17.4 1.0
PG A:GNP528 3.2 18.3 1.0
PB A:GNP528 3.3 17.2 1.0
N3B A:GNP528 3.4 15.6 1.0
N A:THR35 3.8 19.2 1.0
N A:SER17 3.9 16.3 1.0
OD2 A:ASP57 3.9 23.2 1.0
O3G A:GNP528 4.0 19.9 1.0
CA A:THR35 4.0 19.7 1.0
CA A:SER17 4.1 16.4 1.0
CG2 A:THR35 4.1 18.7 1.0
OD1 A:ASP57 4.1 21.6 1.0
O A:HOH649 4.1 25.6 1.0
O2A A:GNP528 4.2 16.7 1.0
O1B A:GNP528 4.3 17.2 1.0
O3A A:GNP528 4.3 16.4 1.0
O1G A:GNP528 4.4 20.1 1.0
O A:ASP33 4.4 18.5 1.0
CG A:ASP57 4.4 20.3 1.0
O A:THR58 4.4 20.7 1.0
PA A:GNP528 4.5 17.2 1.0
O1A A:GNP528 4.7 17.3 1.0
C A:PRO34 4.8 20.4 1.0
CB A:LYS16 4.9 16.2 1.0
C A:LYS16 4.9 15.8 1.0
CE A:LYS16 5.0 17.9 1.0

Magnesium binding site 2 out of 2 in 2rgc

Go back to Magnesium Binding Sites List in 2rgc
Magnesium binding site 2 out of 2 in the Crystal Structure of H-RASQ61V-Gppnhp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of H-RASQ61V-Gppnhp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg603

b:25.2
occ:0.50
O A:HOH692 2.1 18.3 1.0
O A:HOH693 2.2 21.0 1.0
O A:THR124 3.9 18.9 1.0
NE2 A:GLN129 4.1 25.6 1.0
O A:HOH655 4.2 28.1 1.0
OE1 A:GLN129 4.3 22.4 1.0
CD A:GLN129 4.6 24.2 1.0
C A:THR124 5.0 19.3 1.0

Reference:

G.Buhrman, G.Wink, C.Mattos. Transformation Efficiency of RASQ61 Mutants Linked to Structural Features of the Switch Regions in the Presence of Raf. Structure V. 15 1618 2007.
ISSN: ISSN 0969-2126
PubMed: 18073111
DOI: 10.1016/J.STR.2007.10.011
Page generated: Wed Aug 14 03:23:22 2024

Last articles

F in 7NTH
F in 7NTI
F in 7NPC
F in 7NRG
F in 7NR5
F in 7NQS
F in 7NOS
F in 7NP5
F in 7NDV
F in 7NP6
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy