Atomistry » Magnesium » PDB 2uxj-2v7y » 2v7q
Atomistry »
  Magnesium »
    PDB 2uxj-2v7y »
      2v7q »

Magnesium in PDB 2v7q: The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1.

Enzymatic activity of The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1.

All present enzymatic activity of The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1.:
3.6.1.14; 3.6.1.34;

Protein crystallography data

The structure of The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1., PDB code: 2v7q was solved by J.R.Gledhill, M.G.Montgomery, A.G.W.Leslie, J.E.Walker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.19 / 2.1
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 262.534, 103.271, 135.559, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 24.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1. (pdb code 2v7q). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1., PDB code: 2v7q:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in 2v7q

Go back to Magnesium Binding Sites List in 2v7q
Magnesium binding site 1 out of 5 in the The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1512

b:27.4
occ:1.00
 O A:HOH2284 2.1 30.5 1.0
O A:HOH2285 2.1 26.4 1.0
O A:HOH2286 2.1 29.2 1.0
O2B A:ATP1511 2.1 27.5 1.0
OG1 A:THR176 2.2 29.4 1.0
O2G A:ATP1511 2.2 29.6 0.8
CB A:THR176 3.2 33.9 1.0
PB A:ATP1511 3.4 27.0 1.0
PG A:ATP1511 3.4 39.0 0.8
O3B A:ATP1511 3.7 31.3 1.0
OD2 A:ASP269 4.0 26.3 1.0
N A:THR176 4.0 30.3 1.0
OD1 A:ASP269 4.1 30.4 1.0
O A:HOH2143 4.2 30.1 1.0
O A:HOH2169 4.2 30.4 1.0
O1G A:ATP1511 4.2 33.5 0.8
CA A:THR176 4.2 31.1 1.0
CG2 A:THR176 4.3 34.4 1.0
O1A A:ATP1511 4.3 31.5 1.0
O A:HOH2170 4.3 31.1 1.0
O1B A:ATP1511 4.4 28.3 1.0
O3A A:ATP1511 4.4 31.1 1.0
CG A:ASP269 4.5 26.6 1.0
O3G A:ATP1511 4.6 39.2 0.8
PA A:ATP1511 4.7 29.9 1.0
O A:HOH2174 4.7 40.2 1.0
O A:HOH2283 4.7 35.6 1.0
O2A A:ATP1511 4.9 31.8 1.0

Magnesium binding site 2 out of 5 in 2v7q

Go back to Magnesium Binding Sites List in 2v7q
Magnesium binding site 2 out of 5 in the The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1512

b:27.8
occ:1.00
 O B:HOH2292 2.0 24.0 1.0
O B:HOH2294 2.0 30.3 1.0
OG1 B:THR176 2.1 25.6 1.0
O B:HOH2293 2.2 27.5 1.0
O2G B:ATP1511 2.2 35.8 1.0
O2B B:ATP1511 2.2 23.3 1.0
CB B:THR176 3.1 27.9 1.0
PG B:ATP1511 3.3 36.3 1.0
PB B:ATP1511 3.3 27.9 1.0
O3B B:ATP1511 3.4 31.4 1.0
N B:THR176 4.0 24.4 1.0
O1G B:ATP1511 4.0 34.1 1.0
OD1 B:ASP269 4.1 26.2 1.0
O B:HOH2287 4.1 28.1 1.0
CA B:THR176 4.1 26.9 1.0
CG2 B:THR176 4.1 27.2 1.0
O1A B:ATP1511 4.1 27.0 1.0
OD2 B:ASP269 4.2 31.7 1.0
O B:HOH2191 4.2 33.4 1.0
O B:HOH2155 4.3 28.8 1.0
O1B B:ATP1511 4.4 25.3 1.0
O3A B:ATP1511 4.4 27.7 1.0
O B:HOH2189 4.4 37.8 1.0
O3G B:ATP1511 4.5 37.1 1.0
CG B:ASP269 4.6 29.6 1.0
PA B:ATP1511 4.6 27.4 1.0
O B:HOH2288 4.6 34.6 1.0
O B:HOH2291 4.9 30.7 1.0
O2A B:ATP1511 4.9 24.4 1.0
O B:HOH2240 5.0 23.4 1.0

Magnesium binding site 3 out of 5 in 2v7q

Go back to Magnesium Binding Sites List in 2v7q
Magnesium binding site 3 out of 5 in the The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg1512

b:29.5
occ:1.00
 OG1 C:THR176 2.0 30.8 1.0
O C:HOH2296 2.1 28.8 1.0
O C:HOH2295 2.1 30.2 1.0
O C:HOH2294 2.2 30.6 1.0
O2G C:ATP1511 2.2 26.8 0.8
O2B C:ATP1511 2.2 25.4 1.0
CB C:THR176 3.1 31.5 1.0
PG C:ATP1511 3.3 34.7 0.8
PB C:ATP1511 3.4 30.0 1.0
O3B C:ATP1511 3.7 31.1 1.0
O1G C:ATP1511 3.9 33.5 0.8
N C:THR176 4.0 28.8 1.0
CA C:THR176 4.1 29.6 1.0
OD2 C:ASP269 4.1 35.2 1.0
OD1 C:ASP269 4.1 36.0 1.0
O C:HOH2148 4.1 35.0 1.0
CG2 C:THR176 4.2 29.1 1.0
O C:HOH2178 4.2 27.0 1.0
O1A C:ATP1511 4.2 32.6 1.0
O C:HOH2292 4.3 26.9 1.0
O3A C:ATP1511 4.4 28.7 1.0
O C:HOH2287 4.4 41.9 1.0
O1B C:ATP1511 4.5 30.0 1.0
CG C:ASP269 4.5 33.3 1.0
O C:HOH2293 4.6 30.1 1.0
O3G C:ATP1511 4.6 37.5 0.8
PA C:ATP1511 4.6 30.6 1.0
O C:HOH2284 4.8 33.9 1.0
O2A C:ATP1511 4.9 26.5 1.0

Magnesium binding site 4 out of 5 in 2v7q

Go back to Magnesium Binding Sites List in 2v7q
Magnesium binding site 4 out of 5 in the The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1. within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg1479

b:24.8
occ:1.00
 O2B D:ADP1478 2.0 23.0 1.0
O D:HOH2366 2.1 24.9 1.0
OG1 D:THR163 2.1 27.5 1.0
O D:HOH2367 2.1 24.4 1.0
O D:HOH2364 2.1 25.9 1.0
O D:HOH2365 2.1 25.2 1.0
CB D:THR163 3.2 22.8 1.0
PB D:ADP1478 3.3 24.1 1.0
O1B D:ADP1478 3.6 25.5 1.0
OE1 D:GLU188 4.1 39.4 1.0
O D:HOH2156 4.1 23.4 1.0
N D:THR163 4.1 23.2 1.0
OD2 D:ASP256 4.1 27.9 1.0
NH1 D:ARG189 4.1 28.8 1.0
OE2 D:GLU192 4.2 24.6 1.0
CG2 D:THR163 4.2 24.7 1.0
CA D:THR163 4.2 23.6 1.0
O1A D:ADP1478 4.2 24.3 1.0
O3A D:ADP1478 4.3 22.6 1.0
OD1 D:ASP256 4.3 27.9 1.0
O3B D:ADP1478 4.4 22.8 1.0
OE1 D:GLU192 4.4 28.6 1.0
PA D:ADP1478 4.5 27.7 1.0
O D:HOH2155 4.6 33.1 1.0
O2A D:ADP1478 4.6 28.1 1.0
CG D:ASP256 4.7 30.1 1.0
CD D:GLU192 4.7 26.6 1.0
CD D:GLU188 4.7 35.7 1.0
O D:HOH2363 4.7 31.6 1.0
O D:HOH2144 4.8 33.3 1.0
CE D:LYS162 4.8 18.6 1.0
CB D:LYS162 4.9 21.3 1.0

Magnesium binding site 5 out of 5 in 2v7q

Go back to Magnesium Binding Sites List in 2v7q
Magnesium binding site 5 out of 5 in the The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of The Structure of F1-Atpase Inhibited By I1-60HIS, A Monomeric Form of the Inhibitor Protein, IF1. within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg1476

b:27.5
occ:1.00
 O2B F:ADP1475 2.0 27.6 1.0
O F:HOH2316 2.1 26.6 1.0
OG1 F:THR163 2.1 33.1 1.0
O F:HOH2315 2.1 25.4 1.0
O F:HOH2314 2.2 20.9 1.0
O F:HOH2313 2.2 25.5 1.0
CB F:THR163 3.3 29.2 1.0
PB F:ADP1475 3.3 28.1 1.0
O1B F:ADP1475 3.7 29.0 1.0
NH1 F:ARG189 4.0 30.0 1.0
OD2 F:ASP256 4.0 28.4 1.0
OE2 F:GLU192 4.0 24.4 1.0
OE1 F:GLU188 4.1 45.6 1.0
N F:THR163 4.1 25.7 1.0
O1A F:ADP1475 4.2 33.0 1.0
O3A F:ADP1475 4.2 27.3 1.0
CA F:THR163 4.3 27.0 1.0
O F:HOH2148 4.3 36.6 1.0
CG2 F:THR163 4.3 28.2 1.0
OD1 F:ASP256 4.3 28.4 1.0
O F:HOH2147 4.4 27.7 1.0
O3B F:ADP1475 4.4 28.9 1.0
NH1 B:ARG373 4.4 60.5 1.0
PA F:ADP1475 4.5 28.6 1.0
OE1 F:GLU192 4.5 30.7 1.0
O2A F:ADP1475 4.6 33.0 1.0
CG F:ASP256 4.6 28.2 1.0
CD F:GLU192 4.7 29.3 1.0
O F:HOH2312 4.7 30.6 1.0
CD F:GLU188 4.7 40.7 1.0
CE F:LYS162 4.9 24.2 1.0
CB F:LYS162 4.9 22.5 1.0

Reference:

J.R.Gledhill, M.G.Montgomery, A.G.W.Leslie, J.E.Walker. How the Regulatory Protein, IF1, Inhibits F1- Atpase From Bovine Mitochondria. Proc.Nat.Acad.Sci.Usa V. 104 15671 2007.
ISSN: ISSN 0027-8424
PubMed: 17895376
DOI: 10.1073/PNAS.0707326104
Page generated: Wed Aug 14 05:01:45 2024

Last articles

Cl in 3QPG
Cl in 3QM1
Cl in 3QOO
Cl in 3QP0
Cl in 3QMN
Cl in 3QOC
Cl in 3QNM
Cl in 3QNK
Cl in 3QNG
Cl in 3QN8
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy