Magnesium in PDB 2v7y: Crystal Structure of the Molecular Chaperone Dnak From Geobacillus Kaustophilus HTA426 in Post-Atp Hydrolysis State

The structure of Crystal Structure of the Molecular Chaperone Dnak From Geobacillus Kaustophilus HTA426 in Post-Atp Hydrolysis State, PDB code: 2v7y was solved by Y.-W.Chang, Y.-J.Sun, C.Wang, C.-D.Hsiao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.58 / 2.37
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	52.753, 71.455, 183.864, 90.00, 90.00, 90.00
R / Rfree (%)	22.7 / 27

The binding sites of Magnesium atom in the Crystal Structure of the Molecular Chaperone Dnak From Geobacillus Kaustophilus HTA426 in Post-Atp Hydrolysis State (pdb code 2v7y). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Molecular Chaperone Dnak From Geobacillus Kaustophilus HTA426 in Post-Atp Hydrolysis State, PDB code: 2v7y:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Molecular Chaperone Dnak From Geobacillus Kaustophilus HTA426 in Post-Atp Hydrolysis State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Molecular Chaperone Dnak From Geobacillus Kaustophilus HTA426 in Post-Atp Hydrolysis State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1507 b:55.3 occ:1.00 O3B A:ADP1505 2.5 29.4 1.0 O2 A:PO41506 2.5 24.8 1.0 P A:PO41506 3.6 28.8 1.0 O A:HOH2166 3.7 26.1 1.0 O3 A:PO41506 3.7 26.3 1.0 PB A:ADP1505 3.9 27.7 1.0 OD2 A:ASP167 4.1 43.4 1.0 O1 A:PO41506 4.1 31.3 1.0 OD1 A:ASP167 4.1 35.6 1.0 OD1 A:ASP8 4.2 31.9 1.0 O2B A:ADP1505 4.3 32.1 1.0 OD2 A:ASP8 4.4 22.3 1.0 O1A A:ADP1505 4.4 33.9 1.0 O A:HOH2089 4.4 25.6 1.0 OE2 A:GLU145 4.4 28.0 1.0 CG A:ASP167 4.6 39.6 1.0 O1B A:ADP1505 4.7 34.1 1.0 CG A:ASP8 4.7 22.3 1.0 O3A A:ADP1505 4.7 30.5 1.0 CD A:GLU145 4.8 29.3 1.0 CG2 A:VAL340 4.8 21.6 1.0 CG1 A:VAL309 4.8 19.4 1.0 O4 A:PO41506 4.9 34.5 1.0

Y.-W.Chang, Y.-J.Sun, C.Wang, C.-D.Hsiao. Crystal Structures of the 70-kDa Heat Shock Proteins in Domain Disjoining Conformation. J.Biol.Chem. V. 283 15502 2008.
ISSN: ISSN 0021-9258
PubMed: 18400763
DOI: 10.1074/JBC.M708992200