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Magnesium in PDB 2vdh: Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
Enzymatic activity of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
All present enzymatic activity of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation:
4.1.1.39;
4.1.1.39;
Protein crystallography data
The structure of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation, PDB code: 2vdh
was solved by
M.-J.Garcia-Murria,
S.Karkehabadi,
J.Marin-Navarro,
S.Satagopan,
I.Andersson,
R.J.Spreitzer,
J.Moreno,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 30.00 / 2.3 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 120.190, 178.349, 122.561, 90.00, 117.87, 90.00 |
| R / Rfree (%) | 17.1 / 20.3 |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
(pdb code 2vdh). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 8 binding sites of Magnesium where determined in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation, PDB code: 2vdh:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Magnesium where determined in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation, PDB code: 2vdh:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Magnesium binding site 1 out of 8 in 2vdh
Go back to
Magnesium Binding Sites List in 2vdh
Magnesium binding site 1 out
of 8 in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation within 5.0Å range:
|
Magnesium binding site 2 out of 8 in 2vdh
Go back to
Magnesium Binding Sites List in 2vdh
Magnesium binding site 2 out
of 8 in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation within 5.0Å range:
|
Magnesium binding site 3 out of 8 in 2vdh
Go back to
Magnesium Binding Sites List in 2vdh
Magnesium binding site 3 out
of 8 in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation within 5.0Å range:
|
Magnesium binding site 4 out of 8 in 2vdh
Go back to
Magnesium Binding Sites List in 2vdh
Magnesium binding site 4 out
of 8 in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation within 5.0Å range:
|
Magnesium binding site 5 out of 8 in 2vdh
Go back to
Magnesium Binding Sites List in 2vdh
Magnesium binding site 5 out
of 8 in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation within 5.0Å range:
|
Magnesium binding site 6 out of 8 in 2vdh
Go back to
Magnesium Binding Sites List in 2vdh
Magnesium binding site 6 out
of 8 in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation within 5.0Å range:
|
Magnesium binding site 7 out of 8 in 2vdh
Go back to
Magnesium Binding Sites List in 2vdh
Magnesium binding site 7 out
of 8 in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation within 5.0Å range:
|
Magnesium binding site 8 out of 8 in 2vdh
Go back to
Magnesium Binding Sites List in 2vdh
Magnesium binding site 8 out
of 8 in the Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Crystal Structure of Chlamydomonas Reinhardtii Rubisco with A Large-Subunit C172S Mutation within 5.0Å range:
|
Reference:
M.-J.Garcia-Murria,
S.Karkehabadi,
J.Marin-Navarro,
S.Satagopan,
I.Andersson,
R.J.Spreitzer,
J.Moreno.
Structural and Functional Consequences of the Replacement of Proximal Residues Cys-172 and Cys- 192 in the Large Subunit of Ribulose 1,5- Bisphosphate Carboxylase/Oxygenase From Chlamydomonas Reinhardtii Biochem.J. V. 411 241 2008.
ISSN: ISSN 0264-6021
PubMed: 18072944
DOI: 10.1042/BJ20071422
Page generated: Wed Aug 14 05:08:41 2024
ISSN: ISSN 0264-6021
PubMed: 18072944
DOI: 10.1042/BJ20071422
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