Magnesium in PDB 2vrn: The Structure of the Stress Response Protein DR1199 From Deinococcus Radiodurans: A Member of the Dj-1 Superfamily

The structure of The Structure of the Stress Response Protein DR1199 From Deinococcus Radiodurans: A Member of the Dj-1 Superfamily, PDB code: 2vrn was solved by E.Fioravanti, M.A.Dura, D.Lascoux, E.Micossi, S.Mcsweeney, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.94 / 2.15
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	65.838, 88.562, 64.088, 90.00, 90.00, 90.00
R / Rfree (%)	20 / 26.1

The binding sites of Magnesium atom in the The Structure of the Stress Response Protein DR1199 From Deinococcus Radiodurans: A Member of the Dj-1 Superfamily (pdb code 2vrn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Structure of the Stress Response Protein DR1199 From Deinococcus Radiodurans: A Member of the Dj-1 Superfamily, PDB code: 2vrn:

Magnesium binding site 1 out of 1 in the The Structure of the Stress Response Protein DR1199 From Deinococcus Radiodurans: A Member of the Dj-1 Superfamily


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of the Stress Response Protein DR1199 From Deinococcus Radiodurans: A Member of the Dj-1 Superfamily within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1191 b:50.2 occ:1.00 OE2 A:GLU182 1.9 31.7 1.0 O A:HOH2073 2.1 26.8 1.0 OE1 A:GLU179 2.3 34.4 1.0 O A:HOH2085 2.8 35.1 1.0 NE2 A:HIS185 2.9 25.8 1.0 CD A:GLU182 3.1 31.1 1.0 CD A:GLU179 3.2 32.1 1.0 CD2 A:HIS185 3.3 26.8 1.0 OE2 A:GLU179 3.4 31.4 1.0 OE1 A:GLU182 3.7 26.7 1.0 O A:HOH2081 4.0 41.0 1.0 CE1 A:HIS185 4.1 28.3 1.0 CG A:GLU182 4.2 31.2 1.0 CA A:GLY159 4.4 26.0 1.0 CG2 A:THR156 4.4 28.8 1.0 N A:GLY159 4.5 26.6 1.0 CG A:GLU179 4.6 30.4 1.0 CG A:HIS185 4.6 28.5 1.0 OE2 A:GLU178 4.8 34.9 1.0 ND1 A:HIS185 4.9 27.9 1.0

E.Fioravanti, M.A.Dura, D.Lascoux, E.Micossi, B.Franzetti, S.Mcsweeney. Structure of the Stress Response Protein DR1199 From Deinococcus Radiodurans: A Member of the Dj-1 Superfamily. Biochemistry V. 47 11581 2008.
ISSN: ISSN 1520-4995
PubMed: 18850720
DOI: 10.1021/BI800882V