Magnesium in PDB 2wag: The Structure of A Family 25 Glycosyl Hydrolase From Bacillus Anthracis.

All present enzymatic activity of The Structure of A Family 25 Glycosyl Hydrolase From Bacillus Anthracis.:
3.2.1.17;

The structure of The Structure of A Family 25 Glycosyl Hydrolase From Bacillus Anthracis., PDB code: 2wag was solved by C.Martinez-Fleites, J.E.Korczynska, M.Cope, J.P.Turkenburg, E.J.Taylor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.73 / 1.40
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	100.522, 100.521, 106.720, 90.00, 90.00, 120.00
R / Rfree (%)	18.7 / 21.2

The binding sites of Magnesium atom in the The Structure of A Family 25 Glycosyl Hydrolase From Bacillus Anthracis. (pdb code 2wag). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Structure of A Family 25 Glycosyl Hydrolase From Bacillus Anthracis., PDB code: 2wag:

Magnesium binding site 1 out of 1 in the The Structure of A Family 25 Glycosyl Hydrolase From Bacillus Anthracis.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of A Family 25 Glycosyl Hydrolase From Bacillus Anthracis. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1231 b:23.9 occ:1.00 O A:ILE154 2.7 11.3 0.5 O A:ILE154 2.8 10.7 0.5 NH1 A:ARG178 2.9 8.9 0.5 O A:ALA157 2.9 11.4 1.0 NH1 A:ARG178 3.0 12.2 0.5 OD2 A:ASP176 3.0 12.6 1.0 CD A:ARG178 3.0 11.4 0.5 OH A:TYR150 3.1 10.5 1.0 N A:ASP156 3.4 11.1 1.0 N A:ALA157 3.5 11.2 1.0 O A:HOH2273 3.5 14.1 1.0 CD A:ARG178 3.5 9.8 0.5 C A:ILE154 3.7 10.7 0.5 O A:HOH2299 3.7 18.5 1.0 CA A:LYS155 3.7 11.4 1.0 C A:ILE154 3.7 10.0 0.5 C A:LYS155 3.8 11.2 1.0 CZ A:TYR150 3.8 8.5 1.0 NE A:ARG178 3.9 10.7 0.5 CZ A:ARG178 3.9 11.6 0.5 C A:ALA157 3.9 10.9 1.0 CZ A:ARG178 3.9 8.3 0.5 N A:LYS155 4.1 10.8 1.0 CG A:ASP176 4.1 12.1 1.0 NE A:ARG178 4.2 10.0 0.5 CG A:ARG178 4.2 12.2 0.5 CE1 A:TYR150 4.2 8.7 1.0 CA A:ASP156 4.2 12.2 1.0 CA A:ALA157 4.3 11.4 1.0 CG2 A:ILE154 4.3 8.5 0.5 C A:ASP156 4.3 12.2 1.0 OD1 A:ASP176 4.5 13.2 1.0 CG2 A:ILE154 4.5 11.1 0.5 O A:LYS155 4.7 11.3 1.0 CE2 A:TYR150 4.7 9.1 1.0 CG A:ARG178 4.8 10.7 0.5 CB A:ARG178 4.9 12.1 0.5 CA A:ILE154 4.9 11.0 0.5 CA A:ILE154 4.9 9.9 0.5 CB A:ARG178 5.0 12.6 0.5

C.Martinez-Fleites, J.E.Korczynska, M.Cope, J.P.Turkenburg, E.J.Taylor. The Crystal Structure of A Family GH25 Lysozyme From Bacillus Anthracis Implies A Neighboring-Group Catalytic Mechanism with Retention of Anomeric Configuration Carbohydr.Res. V. 344 1753 2009.
ISSN: ISSN 0008-6215
PubMed: 19595298
DOI: 10.1016/J.CARRES.2009.06.001