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Magnesium in PDB 2wia: Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Apo Form

Protein crystallography data

The structure of Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Apo Form, PDB code: 2wia was solved by K.-W.Hung, Y.-W.Chang, J.-H.Chen, Y.-C.Chen, Y.-J.Sun, C.-D.Hsiao, T.-H.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.13 / 2.45
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 84.204, 84.204, 122.457, 90.00, 90.00, 120.00
R / Rfree (%) 20.9 / 23

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Apo Form (pdb code 2wia). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Apo Form, PDB code: 2wia:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2wia

Go back to Magnesium Binding Sites List in 2wia
Magnesium binding site 1 out of 2 in the Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Apo Form


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1262

b:19.6
occ:0.33
OD2 A:ASP133 2.8 29.8 1.0
OD1 A:ASP133 3.5 30.1 1.0
CG A:ASP133 3.5 28.3 1.0
O A:HOH2064 4.2 20.1 1.0
CB A:ALA136 4.4 16.5 1.0
O A:HOH2062 4.7 23.1 1.0
N A:ALA136 4.8 19.9 1.0
O A:HOH2063 4.9 3.9 1.0
CB A:ASP133 4.9 27.6 1.0

Magnesium binding site 2 out of 2 in 2wia

Go back to Magnesium Binding Sites List in 2wia
Magnesium binding site 2 out of 2 in the Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Apo Form


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1262

b:34.6
occ:0.33
OD2 B:ASP133 2.4 20.4 1.0
O B:HOH2061 3.3 30.5 1.0
CG B:ASP133 3.3 19.9 1.0
OD1 B:ASP133 3.4 23.5 1.0
CB B:ALA136 4.1 18.2 1.0
CB B:ASP133 4.7 19.1 1.0
N B:ALA136 4.8 18.9 1.0
CA B:ALA136 4.8 17.4 1.0
O B:HOH2094 5.0 19.8 1.0

Reference:

K.-W.Hung, Y.-W.Chang, E.T.Eng, J.-H.Chen, Y.-C.Chen, Y.-J.Sun, C.-D.Hsiao, G.Dong, K.A.Spasov, V.M.Unger, T.-H.Huang. Structural Fold, Conservation and Fe(II) Binding of the Intracellular Domain of Prokaryote Feob. J.Struct.Biol. V. 170 501 2010.
ISSN: ISSN 1047-8477
PubMed: 20123128
DOI: 10.1016/J.JSB.2010.01.017
Page generated: Wed Aug 14 06:07:03 2024

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