Magnesium in PDB 2wic: Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Gmppnp Binding State

The structure of Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Gmppnp Binding State, PDB code: 2wic was solved by K.-W.Hung, Y.-W.Chang, J.-H.Chen, Y.-C.Chen, Y.-J.Sun, C.-D.Hsiao, T.-H.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.93 / 2.05
Space group	P 21 3
Cell size a, b, c (Å), α, β, γ (°)	106.897, 106.897, 106.897, 90.00, 90.00, 90.00
R / Rfree (%)	21.5 / 21.8

The binding sites of Magnesium atom in the Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Gmppnp Binding State (pdb code 2wic). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Gmppnp Binding State, PDB code: 2wic:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Gmppnp Binding State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Gmppnp Binding State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1266 b:40.5 occ:1.00 O A:HOH2060 2.0 38.5 1.0 O A:HOH2008 2.0 37.6 1.0 O A:HOH2002 2.1 36.2 1.0 O2G A:GNP1265 2.1 44.2 1.0 O1B A:GNP1265 2.1 41.2 1.0 OG1 A:THR17 2.1 31.2 1.0 CB A:THR17 3.2 33.3 1.0 PB A:GNP1265 3.2 38.0 1.0 PG A:GNP1265 3.4 43.0 1.0 N3B A:GNP1265 3.7 43.0 1.0 N A:THR17 3.9 31.8 1.0 CA A:THR17 4.1 32.1 1.0 O2A A:GNP1265 4.1 43.8 1.0 OD2 A:ASP56 4.2 35.6 1.0 OD1 A:ASP56 4.3 38.1 1.0 CG2 A:THR17 4.3 30.4 1.0 O3A A:GNP1265 4.3 39.2 1.0 O1G A:GNP1265 4.3 42.9 1.0 O3G A:GNP1265 4.4 47.8 1.0 O2B A:GNP1265 4.6 40.5 1.0 CG A:ASP56 4.7 38.1 1.0 PA A:GNP1265 4.7 42.3 1.0 CB A:LYS16 4.9 29.5 1.0 CE A:LYS16 4.9 30.0 1.0 O1A A:GNP1265 4.9 41.5 1.0 NZ A:LYS16 4.9 31.4 1.0 C A:LYS16 5.0 31.6 1.0

Magnesium binding site 2 out of 2 in the Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Gmppnp Binding State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structures of the N-Terminal Intracellular Domain of Feob From Klebsiella Pneumoniae in Gmppnp Binding State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1267 b:1.0 occ:0.33 O A:HOH2026 2.0 19.5 1.0 OD2 A:ASP133 2.0 21.5 1.0 CG A:ASP133 3.0 21.6 1.0 OD1 A:ASP133 3.4 20.3 1.0 O A:HOH2027 4.1 41.6 1.0 CB A:ASP133 4.4 23.0 1.0 CB A:ALA136 4.4 23.1 1.0 N A:ALA136 4.9 20.3 1.0 O A:HOH2056 5.0 19.3 1.0

K.-W.Hung, Y.-W.Chang, E.T.Eng, J.-H.Chen, Y.-C.Chen, Y.-J.Sun, C.-D.Hsiao, G.Dong, K.A.Spasov, V.M.Unger, T.-H.Huang. Structural Fold, Conservation and Fe(II) Binding of the Intracellular Domain of Prokaryote Feob. J.Struct.Biol. V. 170 501 2010.
ISSN: ISSN 1047-8477
PubMed: 20123128
DOI: 10.1016/J.JSB.2010.01.017