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Magnesium in PDB 2wmb: Structural and Thermodynamic Consequences of Cyclization of Peptide Ligands For the Recruitment Site of Cyclin A

Enzymatic activity of Structural and Thermodynamic Consequences of Cyclization of Peptide Ligands For the Recruitment Site of Cyclin A

All present enzymatic activity of Structural and Thermodynamic Consequences of Cyclization of Peptide Ligands For the Recruitment Site of Cyclin A:
2.7.11.22;

Protein crystallography data

The structure of Structural and Thermodynamic Consequences of Cyclization of Peptide Ligands For the Recruitment Site of Cyclin A, PDB code: 2wmb was solved by G.F.Robertson, J.A.Endicott, M.E.M.Noble, J.M.Mcdonnell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.04 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 73.747, 134.223, 148.236, 90.00, 90.00, 90.00
R / Rfree (%) 22.6 / 29.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structural and Thermodynamic Consequences of Cyclization of Peptide Ligands For the Recruitment Site of Cyclin A (pdb code 2wmb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structural and Thermodynamic Consequences of Cyclization of Peptide Ligands For the Recruitment Site of Cyclin A, PDB code: 2wmb:

Magnesium binding site 1 out of 1 in 2wmb

Go back to Magnesium Binding Sites List in 2wmb
Magnesium binding site 1 out of 1 in the Structural and Thermodynamic Consequences of Cyclization of Peptide Ligands For the Recruitment Site of Cyclin A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structural and Thermodynamic Consequences of Cyclization of Peptide Ligands For the Recruitment Site of Cyclin A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1433

b:91.0
occ:1.00
 OD1 A:ASN132 2.9 24.6 1.0
OD2 A:ASP145 2.9 36.1 1.0
CB A:ASP145 3.0 26.0 1.0
CG A:ASP145 3.2 31.7 1.0
CG A:ASN132 3.9 22.9 1.0
CA A:ASP145 4.1 25.4 1.0
N A:ASP145 4.4 24.2 1.0
OD1 A:ASP145 4.4 35.4 1.0
CA A:ASN132 4.4 21.8 1.0
CB A:ASN132 4.5 21.2 1.0
O A:GLN131 4.7 24.2 1.0
ND2 A:ASN132 4.8 20.8 1.0

Reference:

G.F.Robertson, J.A.Endicott, M.E.M.Noble, J.M.Mcdonnell. Structural and Thermodynamic Consequences of Cyclization of Peptide Ligands For the Recruitment Site of Cyclin A To Be Published.
Page generated: Wed Aug 14 06:10:49 2024

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