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Magnesium in PDB 2wto: Crystal Structure of Apo-Form Czce From C. Metallidurans CH34

Protein crystallography data

The structure of Crystal Structure of Apo-Form Czce From C. Metallidurans CH34, PDB code: 2wto was solved by I.Haertlein, E.Girard, G.Sarret, J.Hazemann, P.Gourhant, R.Kahn, J.Coves, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.249 / 1.85
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 105.430, 29.610, 70.960, 90.00, 113.75, 90.00
R / Rfree (%) 16.35 / 19.21

Other elements in 2wto:

The structure of Crystal Structure of Apo-Form Czce From C. Metallidurans CH34 also contains other interesting chemical elements:

Chlorine (Cl) 10 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Apo-Form Czce From C. Metallidurans CH34 (pdb code 2wto). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Apo-Form Czce From C. Metallidurans CH34, PDB code: 2wto:

Magnesium binding site 1 out of 1 in 2wto

Go back to Magnesium Binding Sites List in 2wto
Magnesium binding site 1 out of 1 in the Crystal Structure of Apo-Form Czce From C. Metallidurans CH34


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Apo-Form Czce From C. Metallidurans CH34 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1113

b:22.3
occ:0.80
OD2 A:ASP100 2.0 21.4 1.0
O B:HOH2103 2.0 11.6 1.0
O A:HOH2119 2.1 25.6 1.0
O B:HOH2085 2.1 31.2 1.0
O B:HOH2084 2.1 24.4 1.0
OD1 B:ASP100 2.3 22.2 1.0
O A:HOH2118 2.8 26.2 1.0
CG A:ASP100 3.0 15.7 1.0
OD1 A:ASP100 3.3 18.1 1.0
O A:HOH2076 3.3 29.9 1.0
CG B:ASP100 3.4 26.1 1.0
OD2 B:ASP100 3.9 24.2 1.0
OD1 B:ASP77 4.1 20.0 1.0
O A:ARG101 4.1 7.5 1.0
O B:HOH2106 4.2 21.3 1.0
OD2 B:ASP77 4.2 28.5 1.0
O A:HOH2120 4.2 8.5 1.0
O B:HOH2107 4.3 32.3 1.0
CB A:ASP100 4.3 8.9 1.0
OD1 A:ASP103 4.3 27.3 1.0
CG B:ASP77 4.6 20.7 1.0
O A:HOH2097 4.6 28.4 1.0
CB B:ASP100 4.7 9.1 1.0
OD2 A:ASP103 4.7 35.2 1.0
OD1 A:ASP53 4.8 14.5 1.0
CG A:ASP103 4.9 22.7 1.0

Reference:

I.Petit-Haertlein, E.Girard, G.Sarret, J.Hazemann, P.Gourhant, R.Kahn, J.Coves. Evidence For Conformational Changes Upon Copper Binding to Cupriavidus Metallidurans Czce. Biochemistry V. 49 1913 2010.
ISSN: ISSN 0006-2960
PubMed: 20112954
DOI: 10.1021/BI100001Z
Page generated: Wed Aug 14 06:13:32 2024

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