Atomistry » Magnesium » PDB 2wkp-2x0q » 2ww8
Atomistry »
  Magnesium »
    PDB 2wkp-2x0q »
      2ww8 »

Magnesium in PDB 2ww8: Structure of the Pilus Adhesin (Rrga) From Streptococcus Pneumoniae

Protein crystallography data

The structure of Structure of the Pilus Adhesin (Rrga) From Streptococcus Pneumoniae, PDB code: 2ww8 was solved by T.Izore, C.Contreras-Martel, L.El-Mortaji, C.Manzano, R.Terrasse, T.Vernet, A.M.Di-Guilmi, A.Dessen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 149.07 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.081, 82.700, 299.338, 90.00, 90.00, 90.00
R / Rfree (%) 19.518 / 23.46

Other elements in 2ww8:

The structure of Structure of the Pilus Adhesin (Rrga) From Streptococcus Pneumoniae also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Pilus Adhesin (Rrga) From Streptococcus Pneumoniae (pdb code 2ww8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Pilus Adhesin (Rrga) From Streptococcus Pneumoniae, PDB code: 2ww8:

Magnesium binding site 1 out of 1 in 2ww8

Go back to Magnesium Binding Sites List in 2ww8
Magnesium binding site 1 out of 1 in the Structure of the Pilus Adhesin (Rrga) From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Pilus Adhesin (Rrga) From Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1000

b:21.1
occ:1.00
O A:HOH2161 2.0 19.0 1.0
O A:HOH2153 2.1 16.8 1.0
O A:HOH2355 2.1 19.8 1.0
OG A:SER234 2.2 16.0 1.0
OG A:SER236 2.2 16.3 1.0
OD1 A:ASP387 2.2 16.1 1.0
CG A:ASP387 3.2 15.2 1.0
CB A:SER234 3.3 15.9 1.0
CB A:SER236 3.5 15.8 1.0
OD2 A:ASP387 3.5 15.2 1.0
OG1 A:THR357 3.8 14.4 1.0
OD2 A:ASP232 3.8 11.7 1.0
OD1 A:ASP232 3.9 19.2 1.0
O A:ASP387 4.0 15.6 1.0
C A:ASP387 4.1 14.6 1.0
O A:HOH2329 4.2 19.6 1.0
N A:GLY388 4.3 14.8 1.0
CG A:ASP232 4.3 17.8 1.0
CA A:GLY388 4.4 15.6 1.0
CA A:SER234 4.5 14.4 1.0
CB A:ASP387 4.5 12.8 1.0
N A:SER236 4.5 13.4 1.0
CA A:SER236 4.5 16.1 1.0
CA A:ASP387 4.7 15.6 1.0
O A:HOH2530 4.7 32.1 1.0
C A:SER234 4.7 13.9 1.0
N A:MET237 4.9 15.3 1.0
N A:ASP387 4.9 15.6 1.0
O A:HOH2357 4.9 20.1 1.0
C A:SER236 4.9 15.7 1.0
CG A:MET237 5.0 13.5 1.0

Reference:

T.Izore, C.Contreras-Martel, L.El-Mortaji, C.Manzano, R.Terrasse, T.Vernet, A.M.Di-Guilmi, A.Dessen. Structural Basis of Host Cell Recognition By the Pilus Adhesin From Streptococcus Pneumoniae Structure V. 18 106 2010.
ISSN: ISSN 0969-2126
PubMed: 20152157
DOI: 10.1016/J.STR.2009.10.019
Page generated: Wed Aug 14 06:18:37 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy