Atomistry » Magnesium » PDB 2xni-2xzs » 2xt3
Atomistry »
  Magnesium »
    PDB 2xni-2xzs »
      2xt3 »

Magnesium in PDB 2xt3: Human KIF7, A Kinesin Involved in Hedgehog Signalling

Protein crystallography data

The structure of Human KIF7, A Kinesin Involved in Hedgehog Signalling, PDB code: 2xt3 was solved by M.Klejnot, F.Kozielski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.704 / 1.88
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.920, 79.790, 94.840, 90.00, 90.00, 90.00
R / Rfree (%) 17.91 / 22.91

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human KIF7, A Kinesin Involved in Hedgehog Signalling (pdb code 2xt3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human KIF7, A Kinesin Involved in Hedgehog Signalling, PDB code: 2xt3:

Magnesium binding site 1 out of 1 in 2xt3

Go back to Magnesium Binding Sites List in 2xt3
Magnesium binding site 1 out of 1 in the Human KIF7, A Kinesin Involved in Hedgehog Signalling


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human KIF7, A Kinesin Involved in Hedgehog Signalling within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1346

b:21.4
occ:1.00
O A:HOH2284 2.0 16.1 1.0
O A:HOH2213 2.1 18.0 1.0
O3B A:ADP1345 2.1 17.8 1.0
OG1 A:THR98 2.2 15.2 1.0
O A:HOH2104 2.3 19.1 1.0
O A:HOH2285 2.3 18.3 1.0
PB A:ADP1345 3.2 17.4 1.0
CB A:THR98 3.3 16.1 1.0
O2B A:ADP1345 3.4 20.5 1.0
N A:THR98 4.0 16.6 1.0
O A:HOH2047 4.1 30.0 1.0
O A:HOH2196 4.1 25.9 1.0
O2A A:ADP1345 4.2 25.2 1.0
O A:HOH2102 4.2 17.1 1.0
CA A:THR98 4.2 19.6 1.0
O1B A:ADP1345 4.2 15.2 1.0
O3A A:ADP1345 4.2 17.3 1.0
O A:HOH2215 4.3 22.3 1.0
OD2 A:ASP249 4.3 19.8 1.0
CG2 A:THR98 4.3 21.5 1.0
OD1 A:ASP249 4.3 16.3 1.0
PA A:ADP1345 4.6 19.7 1.0
CE A:LYS97 4.7 18.2 1.0
CG A:ASP249 4.8 21.7 1.0
O A:HOH2289 4.8 21.8 1.0
O1A A:ADP1345 4.8 20.1 1.0
NZ A:LYS97 4.8 16.0 1.0
CB A:LYS97 4.9 10.5 1.0

Reference:

M.Klejnot, F.Kozielski. Structural Insights Into Human KIF7, A Kinesin Involved in Hedgehog Signalling. Acta Crystallogr.,Sect.D V. 68 154 2012.
ISSN: ISSN 0907-4449
PubMed: 22281744
DOI: 10.1107/S0907444911053042
Page generated: Wed Aug 14 07:17:19 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy