Magnesium in PDB 2xuu: Crystal Structure of A Dap-Kinase 1 Mutant

All present enzymatic activity of Crystal Structure of A Dap-Kinase 1 Mutant:
2.7.11.1;

The structure of Crystal Structure of A Dap-Kinase 1 Mutant, PDB code: 2xuu was solved by I.De Diego, J.Kuper, F.Lehmann, M.Wilmanns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	60.36 / 1.80
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	49.740, 84.430, 86.340, 90.00, 90.00, 90.00
R / Rfree (%)	17.638 / 22.583

The binding sites of Magnesium atom in the Crystal Structure of A Dap-Kinase 1 Mutant (pdb code 2xuu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Dap-Kinase 1 Mutant, PDB code: 2xuu:

Magnesium binding site 1 out of 1 in the Crystal Structure of A Dap-Kinase 1 Mutant


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Dap-Kinase 1 Mutant within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1307 b:14.3 occ:1.00 O1A A:ADP1303 2.0 11.3 1.0 O A:HOH2234 2.1 8.6 1.0 O2B A:ADP1303 2.1 17.5 1.0 OD2 A:ASP161 2.2 10.6 1.0 O A:HOH2402 2.2 15.5 1.0 O A:HOH2223 2.2 16.2 1.0 CG A:ASP161 3.1 11.7 1.0 PB A:ADP1303 3.3 16.5 1.0 PA A:ADP1303 3.3 11.6 1.0 O3A A:ADP1303 3.6 13.0 1.0 OD1 A:ASP161 3.8 12.9 1.0 OE2 A:GLU143 3.8 18.6 1.0 O3' A:ADP1303 4.0 13.7 1.0 OD1 A:ASN144 4.0 7.6 1.0 CB A:ASP161 4.0 8.8 1.0 O3B A:ADP1303 4.1 17.7 1.0 O A:HOH2229 4.2 29.9 1.0 O A:HOH2397 4.2 22.6 1.0 OD2 A:ASP139 4.3 16.4 1.0 ND2 A:ASN144 4.4 9.9 1.0 O5' A:ADP1303 4.4 11.6 1.0 O2A A:ADP1303 4.4 12.1 1.0 C5' A:ADP1303 4.4 12.1 1.0 O A:HOH2226 4.4 17.8 1.0 O1B A:ADP1303 4.5 18.4 1.0 C3' A:ADP1303 4.6 7.4 1.0 O A:HOH2045 4.6 25.9 1.0 CG A:ASN144 4.7 9.8 1.0 O A:HOH2399 4.9 32.0 1.0 CD A:GLU143 5.0 21.7 1.0

K.Temmerman, I.De Diego, V.Pogenberg, B.Simon, W.Jonko, X.Li, M.Wilmanns. A Pef/Y Substrate Recognition and Signature Motif Plays A Critical Role in Dapk-Related Kinase Activity. Chem.Biol. V. 21 264 2014.
ISSN: ISSN 1074-5521
PubMed: 24440081
DOI: 10.1016/J.CHEMBIOL.2013.12.008