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Magnesium in PDB 3a5t: Crystal Structure of Mafg-Dna Complex

Protein crystallography data

The structure of Crystal Structure of Mafg-Dna Complex, PDB code: 3a5t was solved by H.Kurokawa, H.Motohashi, S.Sueno, M.Kimura, H.Takagawa, Y.Kanno, M.Yamamoto, T.Tanaka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.08 / 2.80
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 40.364, 185.243, 230.263, 90.00, 90.00, 90.00
R / Rfree (%) 26.1 / 29.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Mafg-Dna Complex (pdb code 3a5t). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Mafg-Dna Complex, PDB code: 3a5t:

Magnesium binding site 1 out of 1 in 3a5t

Go back to Magnesium Binding Sites List in 3a5t
Magnesium binding site 1 out of 1 in the Crystal Structure of Mafg-Dna Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Mafg-Dna Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg2000

b:61.8
occ:0.50
O D:HOH2002 1.8 60.6 1.0
O D:HOH2003 1.8 61.7 1.0
O D:HOH2001 1.8 62.4 1.0
O2 C:DT9 4.1 55.0 1.0
O4' C:DC10 4.3 58.5 1.0
O4' D:DT9 4.4 46.0 1.0
O2 D:DC8 4.4 48.6 1.0
C5' C:DC10 4.4 62.0 1.0
C4' C:DC10 4.4 60.5 1.0
C5' D:DT9 4.4 43.8 1.0
C4' D:DT9 4.5 44.8 1.0

Reference:

H.Kurokawa, H.Motohashi, S.Sueno, M.Kimura, H.Takagawa, Y.Kanno, M.Yamamoto, T.Tanaka. Structural Basis of Alternative Dna Recognition By Maf Transcription Factors Mol.Cell.Biol. V. 29 6232 2009.
ISSN: ISSN 0270-7306
PubMed: 19797082
DOI: 10.1128/MCB.00708-09
Page generated: Mon Dec 14 07:52:32 2020

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