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Magnesium in PDB 3abx: CCCEL6C, A Glycoside Hydrolase Family 6 Enzyme, Complexed with P-Nitrophenyl Beta-D-Cellotrioside

Enzymatic activity of CCCEL6C, A Glycoside Hydrolase Family 6 Enzyme, Complexed with P-Nitrophenyl Beta-D-Cellotrioside

All present enzymatic activity of CCCEL6C, A Glycoside Hydrolase Family 6 Enzyme, Complexed with P-Nitrophenyl Beta-D-Cellotrioside:
3.2.1.91;

Protein crystallography data

The structure of CCCEL6C, A Glycoside Hydrolase Family 6 Enzyme, Complexed with P-Nitrophenyl Beta-D-Cellotrioside, PDB code: 3abx was solved by Y.Liu, M.Yoshida, Y.Kurakata, T.Miyazaki, A.Nishikawa, T.Tonozuka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.89 / 1.40
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 43.876, 45.153, 48.989, 77.63, 86.87, 68.80
R / Rfree (%) 16.3 / 18.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the CCCEL6C, A Glycoside Hydrolase Family 6 Enzyme, Complexed with P-Nitrophenyl Beta-D-Cellotrioside (pdb code 3abx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the CCCEL6C, A Glycoside Hydrolase Family 6 Enzyme, Complexed with P-Nitrophenyl Beta-D-Cellotrioside, PDB code: 3abx:

Magnesium binding site 1 out of 1 in 3abx

Go back to Magnesium Binding Sites List in 3abx
Magnesium binding site 1 out of 1 in the CCCEL6C, A Glycoside Hydrolase Family 6 Enzyme, Complexed with P-Nitrophenyl Beta-D-Cellotrioside


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of CCCEL6C, A Glycoside Hydrolase Family 6 Enzyme, Complexed with P-Nitrophenyl Beta-D-Cellotrioside within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg396

b:15.3
occ:1.00
 O A:HOH737 2.0 23.9 1.0
O A:HOH733 2.0 17.5 1.0
O A:HOH679 2.0 17.7 1.0
O A:HOH706 2.1 15.8 1.0
O A:GLY110 4.0 11.9 1.0
O A:ASP109 4.2 13.6 1.0
NE2 A:HIS113 4.3 19.2 1.0
O A:HOH702 4.3 21.3 1.0
O A:HOH627 4.4 22.4 1.0
O A:SER108 4.4 12.7 1.0
OD1 A:ASP109 4.5 16.0 0.5
C A:ASP109 4.5 13.3 1.0
CA A:ASP109 4.7 13.3 0.5
C A:GLY110 4.8 11.3 1.0
CA A:ASP109 4.8 13.7 0.5
CA A:GLU111 4.8 11.1 1.0

Reference:

Y.Liu, M.Yoshida, Y.Kurakata, T.Miyazaki, K.Igarashi, M.Samejima, K.Fukuda, A.Nishikawa, T.Tonozuka. Crystal Structure of A Glycoside Hydrolase Family 6 Enzyme, CCCEL6C, A Cellulase Constitutively Produced By Coprinopsis Cinerea Febs J. V. 277 1532 2010.
ISSN: ISSN 1742-464X
PubMed: 20148970
DOI: 10.1111/J.1742-4658.2010.07582.X
Page generated: Wed Aug 14 08:33:21 2024

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