Magnesium in PDB 3aq4: Molecular Insights Into Plant Cell Proliferation Disturbance By Agrobacterium Protein 6B

The structure of Molecular Insights Into Plant Cell Proliferation Disturbance By Agrobacterium Protein 6B, PDB code: 3aq4 was solved by M.M.Wang, Y.A.Yuan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	89.80 / 1.80
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	88.710, 89.977, 46.049, 90.00, 90.00, 90.00
R / Rfree (%)	19.9 / 24.1

The binding sites of Magnesium atom in the Molecular Insights Into Plant Cell Proliferation Disturbance By Agrobacterium Protein 6B (pdb code 3aq4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Molecular Insights Into Plant Cell Proliferation Disturbance By Agrobacterium Protein 6B, PDB code: 3aq4:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Molecular Insights Into Plant Cell Proliferation Disturbance By Agrobacterium Protein 6B


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Molecular Insights Into Plant Cell Proliferation Disturbance By Agrobacterium Protein 6B within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg182 b:17.0 occ:1.00 O1B A:GDP183 2.0 14.8 1.0 O A:HOH308 2.1 18.3 1.0 OG1 A:THR31 2.1 15.7 1.0 O A:HOH309 2.1 19.8 1.0 O A:HOH307 2.1 19.0 1.0 O A:HOH224 2.1 18.7 1.0 CB A:THR31 3.2 14.9 1.0 PB A:GDP183 3.2 17.7 1.0 O3B A:GDP183 3.4 18.3 1.0 OE1 A:GLU54 3.9 24.0 1.0 N A:THR31 3.9 15.2 1.0 O2A A:GDP183 4.1 20.8 1.0 CA A:THR31 4.1 15.0 1.0 CG2 A:THR31 4.2 17.1 1.0 OD1 A:ASP67 4.2 26.0 1.0 OE2 A:GLU54 4.3 31.3 1.0 O2B A:GDP183 4.3 19.2 1.0 O B:HOH256 4.3 31.1 1.0 O3A A:GDP183 4.3 17.1 1.0 CD A:GLU54 4.4 21.8 1.0 PA A:GDP183 4.6 18.6 1.0 O A:HOH315 4.6 38.6 1.0 OD2 A:ASP67 4.7 29.5 1.0 O1A A:GDP183 4.7 19.3 1.0 CG A:ASP67 5.0 22.6 1.0 O A:HOH304 5.0 31.1 1.0

Magnesium binding site 2 out of 2 in the Molecular Insights Into Plant Cell Proliferation Disturbance By Agrobacterium Protein 6B


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Molecular Insights Into Plant Cell Proliferation Disturbance By Agrobacterium Protein 6B within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg182 b:15.7 occ:1.00 O1B B:GDP183 2.0 11.6 1.0 O B:HOH219 2.0 17.6 1.0 OG1 B:THR31 2.1 15.8 1.0 O B:HOH282 2.1 14.7 1.0 O B:HOH294 2.1 17.3 1.0 O B:HOH191 2.2 15.1 1.0 CB B:THR31 3.2 12.9 1.0 PB B:GDP183 3.2 14.0 1.0 O3B B:GDP183 3.4 15.4 1.0 N B:THR31 3.9 12.9 1.0 OE1 B:GLU54 4.0 21.0 1.0 O B:HOH232 4.1 45.4 1.0 O B:HOH288 4.1 31.8 1.0 OD1 B:ASP67 4.2 18.8 1.0 OE2 B:GLU54 4.2 25.5 1.0 O2A B:GDP183 4.2 17.7 1.0 CA B:THR31 4.2 13.1 1.0 O2B B:GDP183 4.3 12.3 1.0 O3A B:GDP183 4.3 14.1 1.0 CG2 B:THR31 4.3 16.6 1.0 OD2 B:ASP67 4.4 21.9 1.0 CD B:GLU54 4.5 21.8 1.0 PA B:GDP183 4.6 14.7 1.0 CG B:ASP67 4.8 18.7 1.0 O1A B:GDP183 4.8 15.5 1.0 O B:HOH246 4.9 23.5 1.0

M.M.Wang, T.Soyano, S.Machida, J.Y.Yang, C.Jung, N.H.Chua, Y.A.Yuan. Molecular Insights Into Plant Cell Proliferation Disturbance By Agrobacterium Protein 6B Genes Dev. V. 25 64 2011.
ISSN: ISSN 0890-9369
PubMed: 21156810
DOI: 10.1101/GAD.1985511