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Magnesium in PDB 3bk7: Structure of the Complete ABCE1/Rnaase-L Inhibitor Protein From Pyrococcus Abysii

Protein crystallography data

The structure of Structure of the Complete ABCE1/Rnaase-L Inhibitor Protein From Pyrococcus Abysii, PDB code: 3bk7 was solved by A.Karcher, K.P.Hopfner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 63.200, 63.200, 319.380, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 27.5

Other elements in 3bk7:

The structure of Structure of the Complete ABCE1/Rnaase-L Inhibitor Protein From Pyrococcus Abysii also contains other interesting chemical elements:

Iron (Fe) 8 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Complete ABCE1/Rnaase-L Inhibitor Protein From Pyrococcus Abysii (pdb code 3bk7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of the Complete ABCE1/Rnaase-L Inhibitor Protein From Pyrococcus Abysii, PDB code: 3bk7:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 3bk7

Go back to Magnesium Binding Sites List in 3bk7
Magnesium binding site 1 out of 2 in the Structure of the Complete ABCE1/Rnaase-L Inhibitor Protein From Pyrococcus Abysii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Complete ABCE1/Rnaase-L Inhibitor Protein From Pyrococcus Abysii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg594

b:72.2
occ:1.00
CD1 A:ILE49 3.3 25.7 1.0
CG2 A:ILE49 4.0 26.7 1.0
CG1 A:ILE49 4.5 25.1 1.0
CB A:ILE49 4.6 27.5 1.0
CG1 A:VAL89 4.7 19.6 1.0

Magnesium binding site 2 out of 2 in 3bk7

Go back to Magnesium Binding Sites List in 3bk7
Magnesium binding site 2 out of 2 in the Structure of the Complete ABCE1/Rnaase-L Inhibitor Protein From Pyrococcus Abysii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Complete ABCE1/Rnaase-L Inhibitor Protein From Pyrococcus Abysii within 5.0Å range:

Reference:

A.Karcher, A.Schele, K.P.Hopfner. X-Ray Structure of the Complete Abc Enzyme ABCE1 From Pyrococcus Abyssi J.Biol.Chem. V. 283 7962 2008.
ISSN: ISSN 0021-9258
PubMed: 18160405
DOI: 10.1074/JBC.M707347200
Page generated: Wed Aug 14 09:11:28 2024

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