Magnesium in PDB 3bre: Crystal Structure of P.Aeruginosa PA3702

The structure of Crystal Structure of P.Aeruginosa PA3702, PDB code: 3bre was solved by N.De, M.Pirruccello, P.V.Krasteva, N.Bae, R.V.Raghavan, H.Sondermann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.78 / 2.40
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	144.510, 72.748, 106.095, 90.00, 110.79, 90.00
R / Rfree (%)	24.2 / 27.8

The binding sites of Magnesium atom in the Crystal Structure of P.Aeruginosa PA3702 (pdb code 3bre). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of P.Aeruginosa PA3702, PDB code: 3bre:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of P.Aeruginosa PA3702


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of P.Aeruginosa PA3702 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg359 b:76.2 occ:1.00 OD2 A:ASP70 2.5 70.3 1.0 OD2 A:ASP26 2.7 95.3 1.0 O A:VAL72 2.8 75.7 1.0 NZ A:LYS122 2.8 77.4 1.0 CG A:ASP70 3.2 68.5 1.0 OD1 A:ASP70 3.2 67.5 1.0 OD1 A:ASP25 3.5 82.6 1.0 CG A:ASP26 3.6 94.5 1.0 NE2 A:GLN27 3.7 0.7 1.0 OD1 A:ASP26 3.7 94.8 1.0 CG A:GLN27 3.9 99.3 1.0 C A:VAL72 4.0 75.8 1.0 CE A:LYS122 4.2 75.6 1.0 CG A:ASP25 4.3 83.2 1.0 CD A:GLN27 4.3 0.9 1.0 OD2 A:ASP25 4.3 82.7 1.0 CB A:ASP70 4.6 66.2 1.0 N A:ASP26 4.7 89.7 1.0 CG A:MET73 4.8 80.4 1.0 CA A:MET73 4.8 79.7 1.0 N A:MET73 4.9 77.1 1.0 CB A:ASP26 4.9 92.6 1.0 N A:GLN27 4.9 94.7 1.0 CA A:VAL72 4.9 74.7 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of P.Aeruginosa PA3702


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of P.Aeruginosa PA3702 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg359 b:71.7 occ:1.00 O B:VAL72 2.6 71.4 1.0 OD1 B:ASP70 2.7 66.9 1.0 OD1 B:ASP26 2.8 89.8 1.0 NE2 B:GLN27 2.8 0.1 1.0 OD2 B:ASP70 3.3 67.2 1.0 CG B:ASP70 3.4 67.1 1.0 CG B:ASP26 3.7 89.8 1.0 C B:VAL72 3.8 71.0 1.0 OD2 B:ASP26 3.9 90.2 1.0 OD1 B:ASP25 3.9 85.1 1.0 NZ B:LYS122 3.9 81.8 1.0 CD B:GLN27 4.0 99.1 1.0 CG B:GLN27 4.5 96.7 1.0 CB B:VAL72 4.5 68.4 1.0 CG1 B:VAL72 4.6 67.5 1.0 CA B:VAL72 4.6 69.2 1.0 CG B:ASP25 4.7 83.7 1.0 N B:MET73 4.8 72.8 1.0 CB B:ASP70 4.8 65.3 1.0 CA B:MET73 4.8 75.0 1.0 N B:VAL72 4.9 69.4 1.0 OD2 B:ASP25 4.9 83.0 1.0

N.De, M.Pirruccello, P.V.Krasteva, N.Bae, R.V.Raghavan, H.Sondermann. Phosphorylation-Independent Regulation of the Diguanylate Cyclase Wspr. Plos Biol. V. 6 E67 2008.
ISSN: ISSN 1544-9173
PubMed: 18366254
DOI: 10.1371/JOURNAL.PBIO.0060067