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Magnesium in PDB 3bwd: Crystal Structure of the Plant Rho Protein ROP5

Protein crystallography data

The structure of Crystal Structure of the Plant Rho Protein ROP5, PDB code: 3bwd was solved by C.Thomas, A.Berken, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.72 / 1.53
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 36.420, 40.390, 57.180, 90.00, 102.60, 90.00
R / Rfree (%) 24.7 / 26.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Plant Rho Protein ROP5 (pdb code 3bwd). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Plant Rho Protein ROP5, PDB code: 3bwd:

Magnesium binding site 1 out of 1 in 3bwd

Go back to Magnesium Binding Sites List in 3bwd
Magnesium binding site 1 out of 1 in the Crystal Structure of the Plant Rho Protein ROP5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Plant Rho Protein ROP5 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg181

b:14.6
occ:1.00
O D:HOH224 2.0 17.4 1.0
O2B D:GDP200 2.0 10.3 1.0
OG1 D:THR20 2.1 8.3 1.0
O D:HOH210 2.1 15.2 1.0
O D:HOH225 2.2 18.8 1.0
O D:HOH209 2.2 13.7 1.0
CB D:THR20 3.2 10.1 1.0
PB D:GDP200 3.3 12.0 1.0
O3B D:GDP200 3.5 16.7 1.0
N D:THR20 3.9 8.6 1.0
OD2 D:ASP60 4.0 19.3 1.0
CA D:THR20 4.1 8.4 1.0
O2A D:GDP200 4.1 15.0 1.0
O1B D:GDP200 4.2 13.1 1.0
OD1 D:ASP60 4.3 18.5 1.0
CG2 D:THR20 4.3 9.1 1.0
O3A D:GDP200 4.3 9.7 1.0
PA D:GDP200 4.5 11.8 1.0
CG D:ASP60 4.5 18.4 1.0
O D:HOH203 4.5 17.5 1.0
O1A D:GDP200 4.6 12.7 1.0
O D:THR61 4.7 18.9 1.0
CB D:LYS19 4.9 10.3 1.0
C D:LYS19 5.0 8.6 1.0
NZ D:LYS19 5.0 14.8 1.0
CE D:LYS19 5.0 14.4 1.0

Reference:

C.Thomas, A.Berken. Crystal Structure of the Plant Rho Protein ROP5 To Be Published.
Page generated: Mon Dec 14 07:56:25 2020

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