Magnesium in PDB 3d2e: Crystal Structure of A Complex of SSE1P and HSP70, Selenomethionine- Labeled Crystals

The structure of Crystal Structure of A Complex of SSE1P and HSP70, Selenomethionine- Labeled Crystals, PDB code: 3d2e was solved by S.Polier, A.Bracher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.35
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	129.840, 141.649, 150.516, 90.00, 90.00, 90.00
R / Rfree (%)	21 / 26.2

The binding sites of Magnesium atom in the Crystal Structure of A Complex of SSE1P and HSP70, Selenomethionine- Labeled Crystals (pdb code 3d2e). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of A Complex of SSE1P and HSP70, Selenomethionine- Labeled Crystals, PDB code: 3d2e:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of A Complex of SSE1P and HSP70, Selenomethionine- Labeled Crystals


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Complex of SSE1P and HSP70, Selenomethionine- Labeled Crystals within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2001 b:33.9 occ:1.00 O A:HOH2003 2.0 34.5 1.0 O A:HOH2004 2.1 29.9 1.0 O2B A:ATP1001 2.1 36.2 1.0 O A:HOH2006 2.1 32.2 1.0 O A:HOH2005 2.2 28.2 1.0 O3G A:ATP1001 2.2 36.5 1.0 PB A:ATP1001 3.4 33.3 1.0 PG A:ATP1001 3.5 35.1 1.0 O3B A:ATP1001 3.7 35.2 1.0 OD2 A:ASP203 4.0 42.8 1.0 O A:HOH2011 4.1 37.6 1.0 O A:HOH2100 4.1 43.4 1.0 O3A A:ATP1001 4.1 32.2 1.0 O2A A:ATP1001 4.1 36.4 1.0 OD1 A:ASP8 4.1 36.9 1.0 O A:HOH2007 4.1 25.1 1.0 O1G A:ATP1001 4.2 35.8 1.0 O A:HOH2012 4.3 33.4 1.0 OD1 A:ASP203 4.4 38.1 1.0 OD2 A:ASP8 4.5 36.6 1.0 NZ A:LYS69 4.5 35.0 1.0 PA A:ATP1001 4.5 32.2 1.0 CD1 A:ILE372 4.5 30.7 1.0 O1B A:ATP1001 4.6 33.7 1.0 CG A:ASP203 4.6 38.6 1.0 CA A:GLY10 4.7 33.4 1.0 O2G A:ATP1001 4.7 35.2 1.0 OD2 A:ASP174 4.7 37.7 1.0 CG A:ASP8 4.7 34.1 1.0 O1A A:ATP1001 4.9 30.5 1.0 CA A:GLY205 5.0 33.1 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of A Complex of SSE1P and HSP70, Selenomethionine- Labeled Crystals


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Complex of SSE1P and HSP70, Selenomethionine- Labeled Crystals within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg2001 b:28.8 occ:1.00 O1G C:ATP1001 1.9 34.3 1.0 O C:HOH2005 2.0 25.8 1.0 O C:HOH2002 2.1 25.5 1.0 O C:HOH2003 2.1 32.6 1.0 O C:HOH2004 2.1 28.1 1.0 O2B C:ATP1001 2.2 34.8 1.0 PG C:ATP1001 3.2 35.5 1.0 PB C:ATP1001 3.3 31.4 1.0 O3B C:ATP1001 3.5 32.3 1.0 O2A C:ATP1001 3.9 29.8 1.0 O2G C:ATP1001 3.9 35.6 1.0 O3A C:ATP1001 4.0 32.3 1.0 O C:HOH2006 4.2 25.4 1.0 OD1 C:ASP8 4.2 33.6 1.0 OD2 C:ASP203 4.3 42.9 1.0 O C:HOH2010 4.3 36.9 1.0 O3G C:ATP1001 4.4 34.7 1.0 OD1 C:ASP203 4.4 39.2 1.0 O C:HOH2011 4.4 33.2 1.0 PA C:ATP1001 4.5 31.4 1.0 OD2 C:ASP8 4.5 34.2 1.0 CA C:GLY10 4.5 34.5 1.0 OD2 C:ASP174 4.5 37.7 1.0 O1B C:ATP1001 4.6 34.7 1.0 CG C:ASP203 4.7 37.5 1.0 CD1 C:ILE372 4.8 33.6 1.0 CG C:ASP8 4.8 34.3 1.0 NZ C:LYS69 4.8 35.0 1.0 CA C:GLY205 4.9 33.3 1.0

S.Polier, Z.Dragovic, F.U.Hartl, A.Bracher. Structural Basis For the Cooperation of HSP70 and HSP110 Chaperones in Protein Folding. Cell(Cambridge,Mass.) V. 133 1068 2008.
ISSN: ISSN 0092-8674
PubMed: 18555782
DOI: 10.1016/J.CELL.2008.05.022