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Magnesium in PDB 3deo: Structural Basis For Specific Substrate Recognition By the Chloroplast Signal Recognition Particle Protein CPSRP43

Protein crystallography data

The structure of Structural Basis For Specific Substrate Recognition By the Chloroplast Signal Recognition Particle Protein CPSRP43, PDB code: 3deo was solved by K.F.Stengel, K.Wild, I.Sinning, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.146, 52.794, 62.849, 90.00, 90.00, 90.00
R / Rfree (%) 16.8 / 21.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structural Basis For Specific Substrate Recognition By the Chloroplast Signal Recognition Particle Protein CPSRP43 (pdb code 3deo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structural Basis For Specific Substrate Recognition By the Chloroplast Signal Recognition Particle Protein CPSRP43, PDB code: 3deo:

Magnesium binding site 1 out of 1 in 3deo

Go back to Magnesium Binding Sites List in 3deo
Magnesium binding site 1 out of 1 in the Structural Basis For Specific Substrate Recognition By the Chloroplast Signal Recognition Particle Protein CPSRP43


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structural Basis For Specific Substrate Recognition By the Chloroplast Signal Recognition Particle Protein CPSRP43 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1

b:22.2
occ:1.00
O A:HOH317 2.0 24.5 1.0
O A:HOH373 2.0 22.2 1.0
OE2 A:GLU232 2.1 18.9 1.0
O A:HOH372 2.1 26.7 1.0
O A:HOH284 2.1 19.1 1.0
O A:HOH339 2.2 24.3 1.0
CD A:GLU232 3.1 14.7 1.0
OE1 A:GLU232 3.4 13.8 1.0
O A:HOH352 3.8 38.5 1.0
O A:HOH472 4.1 27.9 1.0
O A:HOH316 4.3 17.3 1.0
CG A:GLU232 4.3 12.3 1.0
OE2 A:GLU223 4.5 16.5 1.0
O A:HOH296 4.5 13.7 1.0
O A:HOH333 4.6 29.8 1.0
O A:HOH319 4.6 27.2 1.0
CG2 A:THR229 4.9 11.4 1.0
O A:GLY227 4.9 16.9 1.0

Reference:

K.F.Stengel, I.Holdermann, P.Cain, C.Robinson, K.Wild, I.Sinning. Structural Basis For Specific Substrate Recognition By the Chloroplast Signal Recognition Particle Protein CPSRP43. Science V. 321 253 2008.
ISSN: ISSN 0036-8075
PubMed: 18621669
DOI: 10.1126/SCIENCE.1158640
Page generated: Mon Dec 14 08:03:56 2020

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