Magnesium in PDB 3dv4: Crystal Structure of SAG506-01, Tetragonal, Crystal 1

The structure of Crystal Structure of SAG506-01, Tetragonal, Crystal 1, PDB code: 3dv4 was solved by C.L.Brooks, R.J.Blackler, S.Gerstenbruch, P.Kosma, S.Muller-Loennies, H.Brade, S.V.Evans, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.81 / 1.95
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	72.510, 72.510, 85.910, 90.00, 90.00, 90.00
R / Rfree (%)	26.9 / 33.6

The binding sites of Magnesium atom in the Crystal Structure of SAG506-01, Tetragonal, Crystal 1 (pdb code 3dv4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of SAG506-01, Tetragonal, Crystal 1, PDB code: 3dv4:

Magnesium binding site 1 out of 1 in the Crystal Structure of SAG506-01, Tetragonal, Crystal 1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of SAG506-01, Tetragonal, Crystal 1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg115 b:37.8 occ:1.00 O A:HOH136 2.8 32.8 1.0 O A:HOH189 2.9 44.7 1.0 OE2 A:GLU55 3.0 32.8 1.0 OD2 B:ASP101 3.0 35.4 1.0 O A:HOH174 3.0 39.7 1.0 O A:HOH184 3.3 41.6 1.0 CD A:GLU55 3.7 31.6 1.0 OE1 A:GLU55 3.8 33.5 1.0 CG B:ASP101 3.8 37.5 1.0 CB B:ASP101 3.9 30.9 1.0 NH2 B:ARG94 4.2 40.7 1.0 CE2 B:TYR102 4.5 35.6 1.0 O B:HOH126 4.6 36.1 1.0 CG1 B:VAL99 4.9 29.5 1.0 OD1 B:ASP101 5.0 32.6 1.0

C.L.Brooks, R.J.Blackler, S.Gerstenbruch, P.Kosma, S.Muller-Loennies, H.Brade, S.V.Evans. Pseudo-Symmetry and Twinning in Crystals of Homologous Antibody Fv Fragments. Acta Crystallogr.,Sect.D V. 64 1250 2008.
ISSN: ISSN 0907-4449
PubMed: 19018101
DOI: 10.1107/S0907444908033453