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Magnesium in PDB 3ea0: Crystal Structure of Para Family Atpase From Chlorobium Tepidum Tls

Protein crystallography data

The structure of Crystal Structure of Para Family Atpase From Chlorobium Tepidum Tls, PDB code: 3ea0 was solved by Y.Kim, C.Tesar, S.Clancy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.45 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.572, 67.032, 134.786, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 25.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Para Family Atpase From Chlorobium Tepidum Tls (pdb code 3ea0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Para Family Atpase From Chlorobium Tepidum Tls, PDB code: 3ea0:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 3ea0

Go back to Magnesium Binding Sites List in 3ea0
Magnesium binding site 1 out of 2 in the Crystal Structure of Para Family Atpase From Chlorobium Tepidum Tls


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Para Family Atpase From Chlorobium Tepidum Tls within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg244

b:36.6
occ:1.00
O3G A:ATP243 2.3 35.4 1.0
OG A:SER40 2.6 50.7 1.0
O A:HOH245 2.7 23.7 1.0
PG A:ATP243 2.8 43.8 0.5
O A:HOH288 2.8 55.2 1.0
O2G A:ATP243 3.0 43.5 1.0
O1G A:ATP243 3.0 43.6 1.0
CB A:SER40 3.0 40.2 1.0
OG A:SER16 3.3 29.9 1.0
O A:HOH294 3.7 52.1 1.0
CA A:GLY124 4.0 37.9 1.0
OD2 A:ASP122 4.0 31.1 1.0
OD1 A:ASP45 4.1 49.8 1.0
O A:HOH274 4.1 42.1 1.0
CA A:GLY44 4.2 32.0 1.0
OD1 A:ASP122 4.3 40.0 1.0
O3B A:ATP243 4.3 24.4 1.0
CG A:ASP122 4.5 40.8 1.0
N A:ASP45 4.5 28.4 1.0
CA A:SER40 4.6 36.7 1.0
CB A:SER16 4.6 32.0 1.0
OD1 A:ASP38 4.7 35.0 1.0
N A:GLY124 4.8 29.2 1.0
O A:HOH286 4.8 77.4 1.0
CG A:ASP45 5.0 45.2 1.0
C A:GLY44 5.0 38.1 1.0
C A:GLY124 5.0 35.5 1.0

Magnesium binding site 2 out of 2 in 3ea0

Go back to Magnesium Binding Sites List in 3ea0
Magnesium binding site 2 out of 2 in the Crystal Structure of Para Family Atpase From Chlorobium Tepidum Tls


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Para Family Atpase From Chlorobium Tepidum Tls within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg244

b:42.9
occ:1.00
O3G B:ATP243 2.2 37.1 1.0
O B:HOH248 2.4 27.4 1.0
OG B:SER40 2.7 55.2 1.0
PG B:ATP243 2.8 45.7 0.7
O2G B:ATP243 3.0 37.9 1.0
CB B:SER40 3.1 44.2 1.0
OG B:SER16 3.2 30.1 1.0
O1G B:ATP243 3.2 34.7 1.0
O B:HOH277 3.9 42.8 1.0
OD2 B:ASP122 3.9 28.6 1.0
CA B:GLY124 3.9 27.6 1.0
O B:HOH264 4.0 49.9 1.0
O B:HOH299 4.0 48.2 1.0
OD1 B:ASP122 4.2 42.5 1.0
CA B:GLY44 4.3 26.2 1.0
O3B B:ATP243 4.3 22.8 1.0
CG B:ASP122 4.4 38.0 1.0
OD1 B:ASP45 4.4 32.2 1.0
N B:ASP45 4.5 29.4 1.0
N B:GLY124 4.5 30.9 1.0
CB B:SER16 4.5 25.9 1.0
CA B:SER40 4.6 39.5 1.0
OD1 B:ASP38 4.8 39.5 1.0
C B:GLY124 4.9 24.0 1.0
C B:GLY44 4.9 29.9 1.0

Reference:

Y.Kim, C.Tesar, S.Clancy, A.Joachimiak. Crystal Structure of Para Family Atpase From Chlorobium Tepidum Tls To Be Published.
Page generated: Mon Dec 14 08:05:57 2020

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