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Magnesium in PDB 3els: Crystal Structure of Yeast PML1P, Residues 51-204

Protein crystallography data

The structure of Crystal Structure of Yeast PML1P, Residues 51-204, PDB code: 3els was solved by S.Trowitzsch, G.Weber, R.Luehrmann, M.C.Wahl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.80
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 100.613, 100.613, 102.196, 90.00, 90.00, 120.00
R / Rfree (%) 18.9 / 23.6

Other elements in 3els:

The structure of Crystal Structure of Yeast PML1P, Residues 51-204 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Yeast PML1P, Residues 51-204 (pdb code 3els). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Yeast PML1P, Residues 51-204, PDB code: 3els:

Magnesium binding site 1 out of 1 in 3els

Go back to Magnesium Binding Sites List in 3els
Magnesium binding site 1 out of 1 in the Crystal Structure of Yeast PML1P, Residues 51-204


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Yeast PML1P, Residues 51-204 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1

b:27.4
occ:0.50
O A:HOH210 2.3 30.2 1.0
O A:ASP128 2.4 30.3 1.0
O A:HOH214 2.6 31.7 1.0
C A:ASP128 3.4 31.2 1.0
OE2 A:GLU109 4.1 36.8 1.0
CA A:ASP128 4.2 31.7 1.0
O A:ALA127 4.3 32.3 1.0
N A:GLY130 4.3 31.3 1.0
N A:ILE129 4.3 30.6 1.0
CA A:ILE129 4.6 30.7 1.0
CE2 A:TYR96 4.9 34.2 1.0
O A:HOH225 4.9 48.5 1.0
C A:ILE129 5.0 30.4 1.0

Reference:

S.Trowitzsch, G.Weber, R.Luhrmann, M.C.Wahl. Crystal Structure of the PML1P Subunit of the Yeast Precursor Mrna Retention and Splicing Complex. J.Mol.Biol. V. 385 531 2009.
ISSN: ISSN 0022-2836
PubMed: 19010333
DOI: 10.1016/J.JMB.2008.10.087
Page generated: Mon Dec 14 08:06:30 2020

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