Magnesium in PDB 3f5g: Crystal Structure of Death Associated Protein Kinase in Complex with Adp and MG2+

All present enzymatic activity of Crystal Structure of Death Associated Protein Kinase in Complex with Adp and MG2+:
2.7.11.1;

The structure of Crystal Structure of Death Associated Protein Kinase in Complex with Adp and MG2+, PDB code: 3f5g was solved by L.K.Mcnamara, D.M.Watterson, J.S.Brunzelle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.85
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	46.807, 62.545, 88.396, 90.00, 90.00, 90.00
R / Rfree (%)	18.5 / 24.4

The binding sites of Magnesium atom in the Crystal Structure of Death Associated Protein Kinase in Complex with Adp and MG2+ (pdb code 3f5g). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Death Associated Protein Kinase in Complex with Adp and MG2+, PDB code: 3f5g:

Magnesium binding site 1 out of 1 in the Crystal Structure of Death Associated Protein Kinase in Complex with Adp and MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Death Associated Protein Kinase in Complex with Adp and MG2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg296 b:37.8 occ:1.00 O1A A:ADP1 2.2 34.3 1.0 OD1 A:ASN144 2.4 19.2 1.0 OD2 A:ASP161 2.8 22.9 1.0 O A:HOH409 3.0 36.0 1.0 O3B A:ADP1 3.0 49.5 1.0 OE2 A:GLU143 3.1 33.5 1.0 CG A:ASN144 3.4 18.9 1.0 O3' A:ADP1 3.5 30.4 1.0 ND2 A:ASN144 3.7 16.5 1.0 PA A:ADP1 3.7 29.9 1.0 CG A:ASP161 3.7 22.2 1.0 CD A:GLU143 3.9 28.3 1.0 CG A:GLU143 4.0 25.8 1.0 NE2 A:GLN23 4.0 35.7 0.5 CB A:ASP161 4.1 18.3 1.0 C3' A:ADP1 4.2 30.9 1.0 C5' A:ADP1 4.2 28.9 1.0 PB A:ADP1 4.3 46.5 1.0 O5' A:ADP1 4.4 31.6 1.0 O3A A:ADP1 4.4 38.2 1.0 O2A A:ADP1 4.7 25.2 1.0 C4' A:ADP1 4.8 29.5 1.0 O A:GLU143 4.8 20.5 1.0 CB A:ASN144 4.8 18.6 1.0 OD1 A:ASP161 4.8 18.9 1.0 CE A:LYS141 4.8 24.1 1.0 O2B A:ADP1 5.0 48.6 1.0

L.K.Mcnamara, D.M.Watterson, J.S.Brunzelle. Structural Insight Into Nucleotide Recognition By Human Death-Associated Protein Kinase. Acta Crystallogr.,Sect.D V. 65 241 2009.
ISSN: ISSN 0907-4449
PubMed: 19237746
DOI: 10.1107/S0907444908043679