Magnesium in PDB 3fa5: Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution

The structure of Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution, PDB code: 3fa5 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.50 / 1.90
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	92.579, 139.567, 45.765, 90.00, 90.00, 90.00
R / Rfree (%)	20.5 / 24.8

The structure of Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Magnesium atom in the Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution (pdb code 3fa5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution, PDB code: 3fa5:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg282 b:24.2 occ:1.00 OE2 A:GLU234 1.8 25.0 1.0 O A:HOH330 1.9 17.2 1.0 O A:HOH442 2.0 19.9 1.0 NE2 A:HIS51 2.3 20.5 1.0 NE2 A:HIS53 2.3 21.7 1.0 O A:HOH466 2.3 19.5 1.0 CD A:GLU234 3.0 25.8 1.0 CE1 A:HIS53 3.2 24.7 1.0 CD2 A:HIS51 3.2 23.1 1.0 CE1 A:HIS51 3.2 22.4 1.0 CD2 A:HIS53 3.3 20.3 1.0 OE1 A:GLU234 3.5 25.7 1.0 NH2 A:ARG230 3.8 22.7 1.0 OG A:SER87 4.1 20.8 1.0 CG A:GLU234 4.2 24.5 1.0 NH1 A:ARG230 4.3 26.0 1.0 ND1 A:HIS51 4.3 22.0 1.0 CG A:HIS51 4.3 21.1 1.0 OE2 A:GLU147 4.3 25.8 1.0 ND1 A:HIS53 4.3 25.1 1.0 CG A:HIS53 4.4 24.6 1.0 CZ A:ARG230 4.5 18.1 1.0 CB A:SER87 4.6 21.7 1.0 O A:HOH426 4.7 47.3 1.0 O A:HOH411 4.8 45.2 1.0 O A:HOH540 4.8 26.0 1.0 OE1 A:GLU147 4.8 26.0 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg282 b:25.3 occ:1.00 O B:HOH582 2.0 27.7 1.0 OE2 B:GLU234 2.0 25.2 1.0 O B:HOH372 2.0 16.7 1.0 NE2 B:HIS53 2.2 22.7 1.0 NE2 B:HIS51 2.2 13.0 1.0 O B:HOH468 2.2 21.4 1.0 CD2 B:HIS51 3.1 16.8 1.0 CD B:GLU234 3.1 28.7 1.0 CE1 B:HIS53 3.1 21.8 1.0 CE1 B:HIS51 3.2 24.0 1.0 CD2 B:HIS53 3.3 17.4 1.0 OE1 B:GLU234 3.5 24.0 1.0 NH2 B:ARG230 3.9 21.6 1.0 OG B:SER87 4.1 19.6 1.0 OE2 B:GLU147 4.1 29.4 1.0 CG B:HIS51 4.2 20.3 1.0 ND1 B:HIS53 4.3 21.8 1.0 ND1 B:HIS51 4.3 15.2 1.0 NH1 B:ARG230 4.3 20.0 1.0 CB B:SER87 4.4 19.5 1.0 CG B:HIS53 4.4 22.1 1.0 CG B:GLU234 4.4 20.9 1.0 CZ B:ARG230 4.6 21.7 1.0 OE1 B:GLU147 4.6 24.0 1.0 O B:HOH606 4.7 31.4 1.0 CD B:GLU147 4.9 23.2 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.