Atomistry » Magnesium » PDB 3fcw-3fpk » 3fk7
Atomistry »
  Magnesium »
    PDB 3fcw-3fpk »
      3fk7 »

Magnesium in PDB 3fk7: Crystal Structure of Tetr Triple Mutant (H64K, S135L, S138I) in Complex with 4-Ddma-Atc

Protein crystallography data

The structure of Crystal Structure of Tetr Triple Mutant (H64K, S135L, S138I) in Complex with 4-Ddma-Atc, PDB code: 3fk7 was solved by M.A.Klieber, O.Scholz, S.Lochner, P.Gmeiner, W.Hillen, Y.A.Muller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.06
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 130.220, 59.380, 63.780, 90.00, 97.85, 90.00
R / Rfree (%) 20.3 / 26.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Tetr Triple Mutant (H64K, S135L, S138I) in Complex with 4-Ddma-Atc (pdb code 3fk7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Tetr Triple Mutant (H64K, S135L, S138I) in Complex with 4-Ddma-Atc, PDB code: 3fk7:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 3fk7

Go back to Magnesium Binding Sites List in 3fk7
Magnesium binding site 1 out of 2 in the Crystal Structure of Tetr Triple Mutant (H64K, S135L, S138I) in Complex with 4-Ddma-Atc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Tetr Triple Mutant (H64K, S135L, S138I) in Complex with 4-Ddma-Atc within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg209

b:51.2
occ:1.00
O11 A:4DM210 2.2 51.1 1.0
O12 A:4DM210 2.3 52.5 1.0
NE2 A:HIS100 2.5 32.6 1.0
OE2 B:GLU147 3.2 40.6 1.0
C12 A:4DM210 3.3 51.4 1.0
C11 A:4DM210 3.3 51.4 1.0
CD2 A:HIS100 3.3 32.9 1.0
CE1 A:HIS100 3.6 33.9 1.0
C1B A:4DM210 3.7 51.1 1.0
O10 A:4DM210 4.0 51.3 1.0
CG2 A:ILE138 4.1 19.8 1.0
CD B:GLU147 4.2 35.4 1.0
OG1 A:THR103 4.3 33.8 1.0
O A:THR103 4.3 39.1 1.0
O A:HOH245 4.3 36.8 1.0
C1A A:4DM210 4.5 51.3 1.0
OE1 B:GLU147 4.5 35.9 1.0
CG A:HIS100 4.6 30.7 1.0
C1C A:4DM210 4.6 50.6 1.0
O A:HOH247 4.6 38.2 1.0
ND1 A:HIS100 4.7 31.8 1.0
O1C A:4DM210 4.7 47.8 1.0
C10 A:4DM210 4.7 51.4 1.0
CD1 A:ILE138 4.8 23.3 1.0

Magnesium binding site 2 out of 2 in 3fk7

Go back to Magnesium Binding Sites List in 3fk7
Magnesium binding site 2 out of 2 in the Crystal Structure of Tetr Triple Mutant (H64K, S135L, S138I) in Complex with 4-Ddma-Atc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Tetr Triple Mutant (H64K, S135L, S138I) in Complex with 4-Ddma-Atc within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg209

b:33.0
occ:0.50
O12 B:4DM210 1.8 40.8 0.5
O B:HOH302 1.8 27.7 0.5
O B:HOH321 2.5 52.3 1.0
NE2 B:HIS100 2.5 19.5 0.5
O B:HOH298 2.8 30.6 0.5
O11 B:4DM210 2.8 41.5 0.5
C12 B:4DM210 3.0 41.3 0.5
CD2 B:HIS100 3.4 22.2 0.5
CE1 B:HIS100 3.5 21.3 0.5
C11 B:4DM210 3.7 41.5 0.5
C1B B:4DM210 3.8 41.4 0.5
O1C B:4DM210 4.0 40.3 0.5
O B:THR103 4.0 29.8 1.0
C1C B:4DM210 4.1 40.7 0.5
OG1 B:THR103 4.4 28.4 1.0
CG2 B:ILE138 4.4 23.7 1.0
OE2 A:GLU147 4.5 39.6 1.0
CG B:HIS100 4.6 23.4 0.5
CD1 B:ILE138 4.6 23.7 1.0
ND1 B:HIS100 4.6 19.7 0.5
O1 B:4DM210 4.8 38.0 0.5
O B:HOH238 4.8 38.2 1.0
C B:THR103 4.9 29.5 1.0
O B:HOH212 4.9 41.3 0.5
O10 B:4DM210 4.9 41.5 0.5
C1A B:4DM210 5.0 41.4 0.5
C1 B:4DM210 5.0 40.8 0.5

Reference:

M.A.Klieber, O.Scholz, S.Lochner, P.Gmeiner, W.Hillen, Y.A.Muller. Structural Origins For Selectivity and Specificity in An Engineered Bacterial Repressor-Inducer Pair. Febs J. V. 276 5610 2009.
ISSN: ISSN 1742-464X
PubMed: 19712110
DOI: 10.1111/J.1742-4658.2009.07254.X
Page generated: Wed Aug 14 13:49:07 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy