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Magnesium in PDB 3fkq: Crystal Structure of Ntrc-Like Two-Domain Protein (RER070207001320) From Eubacterium Rectale at 2.10 A Resolution

Protein crystallography data

The structure of Crystal Structure of Ntrc-Like Two-Domain Protein (RER070207001320) From Eubacterium Rectale at 2.10 A Resolution, PDB code: 3fkq was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.16 / 2.10
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 121.506, 79.495, 55.022, 90.00, 96.16, 90.00
R / Rfree (%) 19 / 21.8

Other elements in 3fkq:

The structure of Crystal Structure of Ntrc-Like Two-Domain Protein (RER070207001320) From Eubacterium Rectale at 2.10 A Resolution also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Ntrc-Like Two-Domain Protein (RER070207001320) From Eubacterium Rectale at 2.10 A Resolution (pdb code 3fkq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Ntrc-Like Two-Domain Protein (RER070207001320) From Eubacterium Rectale at 2.10 A Resolution, PDB code: 3fkq:

Magnesium binding site 1 out of 1 in 3fkq

Go back to Magnesium Binding Sites List in 3fkq
Magnesium binding site 1 out of 1 in the Crystal Structure of Ntrc-Like Two-Domain Protein (RER070207001320) From Eubacterium Rectale at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Ntrc-Like Two-Domain Protein (RER070207001320) From Eubacterium Rectale at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg501

b:27.1
occ:1.00
O A:HOH388 1.9 35.3 1.0
O A:HOH372 2.0 31.4 1.0
O2G A:ATP500 2.0 33.6 1.0
OG A:SER139 2.1 25.6 1.0
OE2 A:GLU162 2.1 27.9 1.0
O1B A:ATP500 2.2 21.1 1.0
CD A:GLU162 3.1 37.8 1.0
CB A:SER139 3.2 27.6 1.0
PB A:ATP500 3.3 24.4 1.0
PG A:ATP500 3.3 30.9 1.0
OE1 A:GLU162 3.4 51.5 1.0
O3B A:ATP500 3.5 30.6 1.0
N A:SER139 3.8 23.9 1.0
O A:HOH371 3.9 30.8 1.0
CA A:SER139 4.1 26.6 1.0
O3G A:ATP500 4.1 27.2 1.0
OD2 A:ASP247 4.1 32.0 1.0
O A:HOH365 4.1 27.4 1.0
O2B A:ATP500 4.3 24.1 1.0
OD1 A:ASP247 4.3 33.3 1.0
O A:HOH373 4.3 31.6 1.0
O1G A:ATP500 4.5 28.0 1.0
CG A:GLU162 4.5 30.3 1.0
O3A A:ATP500 4.5 27.1 1.0
CG A:ASP247 4.7 32.6 1.0
O1A A:ATP500 4.7 25.3 1.0
CB A:THR138 4.8 22.6 1.0
PA A:ATP500 4.8 28.5 1.0
C A:THR138 4.9 23.7 1.0
O2A A:ATP500 4.9 31.8 1.0
O A:HOH377 4.9 33.7 1.0

Reference:

Q.Xu, B.Christen, H.J.Chiu, L.Jaroszewski, H.E.Klock, M.W.Knuth, M.D.Miller, M.A.Elsliger, A.M.Deacon, A.Godzik, S.A.Lesley, D.H.Figurski, L.Shapiro, I.A.Wilson. Structure of the Pilus Assembly Protein Tadz From Eubacterium Rectale: Implications For Polar Localization. Mol.Microbiol. V. 83 712 2012.
ISSN: ISSN 0950-382X
PubMed: 22211578
DOI: 10.1111/J.1365-2958.2011.07954.X
Page generated: Mon Dec 14 08:08:49 2020

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