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Magnesium in PDB 3fm5: X-Ray Crystal Structure of Transcriptional Regulator (Marr Family) From Rhodococcus Sp. RHA1

Protein crystallography data

The structure of X-Ray Crystal Structure of Transcriptional Regulator (Marr Family) From Rhodococcus Sp. RHA1, PDB code: 3fm5 was solved by B.Nocek, X.Xu, H.Zheng, A.Savchenko, A.M.Edwards, A.Joachimiak, Midwestcenter For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.14 / 2.00
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 75.114, 75.114, 213.610, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 24

Other elements in 3fm5:

The structure of X-Ray Crystal Structure of Transcriptional Regulator (Marr Family) From Rhodococcus Sp. RHA1 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the X-Ray Crystal Structure of Transcriptional Regulator (Marr Family) From Rhodococcus Sp. RHA1 (pdb code 3fm5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the X-Ray Crystal Structure of Transcriptional Regulator (Marr Family) From Rhodococcus Sp. RHA1, PDB code: 3fm5:

Magnesium binding site 1 out of 1 in 3fm5

Go back to Magnesium Binding Sites List in 3fm5
Magnesium binding site 1 out of 1 in the X-Ray Crystal Structure of Transcriptional Regulator (Marr Family) From Rhodococcus Sp. RHA1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of X-Ray Crystal Structure of Transcriptional Regulator (Marr Family) From Rhodococcus Sp. RHA1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg201

b:53.7
occ:1.00
O C:HOH200 2.1 32.0 1.0
O C:HOH202 2.1 56.7 1.0
OD2 C:ASP134 2.2 47.3 1.0
O C:HOH219 2.2 59.6 1.0
O C:HOH300 2.2 66.9 1.0
OE1 C:GLN137 2.3 39.6 1.0
CG C:ASP134 3.2 40.2 1.0
CD C:GLN137 3.2 39.0 1.0
NE2 C:GLN137 3.6 38.6 1.0
OD1 C:ASP134 3.9 43.2 1.0
CA C:ASP134 4.1 36.7 1.0
CB C:ASP134 4.1 36.1 1.0
O A:HOH182 4.1 55.0 1.0
O C:HOH217 4.2 45.8 1.0
O C:HOH177 4.5 29.1 1.0
CG C:GLN137 4.6 31.1 1.0
N C:ASP134 4.7 29.0 1.0
CB C:GLN137 4.8 30.9 1.0

Reference:

B.Nocek, X.Xu, H.Zheng, A.Savchenko, A.M.Edwards, A.Joachimiak. X-Ray Crystal Structure of Transcriptional Regulator (Marr Family) From Rhodococcus Sp. RHA1 To Be Published.
Page generated: Mon Dec 14 08:08:51 2020

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