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Magnesium in PDB 3fwz: Crystal Structure of Trka-N Domain of Inner Membrane Protein Ybal From Escherichia Coli

Protein crystallography data

The structure of Crystal Structure of Trka-N Domain of Inner Membrane Protein Ybal From Escherichia Coli, PDB code: 3fwz was solved by C.Chang, L.Bigelow, K.Buck, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.79
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 34.801, 53.071, 72.537, 90.00, 97.82, 90.00
R / Rfree (%) 16.8 / 20.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Trka-N Domain of Inner Membrane Protein Ybal From Escherichia Coli (pdb code 3fwz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Trka-N Domain of Inner Membrane Protein Ybal From Escherichia Coli, PDB code: 3fwz:

Magnesium binding site 1 out of 1 in 3fwz

Go back to Magnesium Binding Sites List in 3fwz
Magnesium binding site 1 out of 1 in the Crystal Structure of Trka-N Domain of Inner Membrane Protein Ybal From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Trka-N Domain of Inner Membrane Protein Ybal From Escherichia Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:17.6
occ:1.00
O B:HOH59 2.1 15.4 1.0
O B:HOH18 2.1 13.3 1.0
O B:HOH82 2.1 17.5 1.0
O B:HOH17 2.2 14.1 1.0
O B:HOH144 4.1 25.1 1.0
O B:HOH25 4.1 14.2 1.0
OD2 B:ASP519 4.2 13.4 1.0
OE2 B:GLU520 4.3 13.4 1.0
OD1 B:ASP519 4.5 13.5 1.0
O B:HOH110 4.5 31.8 1.0
CD2 B:TYR517 4.5 10.7 1.0
CG B:TYR517 4.8 10.0 1.0
CG B:ASP519 4.8 12.4 1.0
CE2 B:TYR517 4.8 10.5 1.0

Reference:

C.Chang, L.Bigelow, K.Buck, A.Joachimiak. Crystal Structure of Trka-N Domain of Inner Membrane Protein Ybal From Escherichia Coli To Be Published.
Page generated: Wed Aug 14 13:57:54 2024

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