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Magnesium in PDB 3g1t: Crystal Structure of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. CT18

Protein crystallography data

The structure of Crystal Structure of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. CT18, PDB code: 3g1t was solved by V.N.Malashkevich, R.Toro, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgxresearch Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.70
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 48.400, 48.400, 380.900, 90.00, 90.00, 120.00
R / Rfree (%) 18.5 / 23.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. CT18 (pdb code 3g1t). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. CT18, PDB code: 3g1t:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 3g1t

Go back to Magnesium Binding Sites List in 3g1t
Magnesium binding site 1 out of 2 in the Crystal Structure of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. CT18


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. CT18 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg259

b:18.7
occ:0.50
O A:HOH363 2.0 12.0 1.0
OD2 A:ASP233 2.1 16.5 1.0
O A:HOH386 2.1 20.8 1.0
CG A:ASP233 3.1 16.6 1.0
OD1 A:ASP233 3.4 17.1 1.0
O A:HOH339 3.9 19.9 1.0
OD2 A:ASP145 4.2 16.2 1.0
O A:HOH309 4.2 15.9 1.0
CB A:ASP233 4.4 17.4 1.0
NH1 A:ARG15 4.4 20.1 1.0
O A:HOH322 4.6 20.5 1.0

Magnesium binding site 2 out of 2 in 3g1t

Go back to Magnesium Binding Sites List in 3g1t
Magnesium binding site 2 out of 2 in the Crystal Structure of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. CT18


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. CT18 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg260

b:33.4
occ:1.00
O A:HOH459 2.0 19.9 1.0
O A:HOH458 2.1 20.6 1.0
O A:HOH453 2.1 25.1 1.0
O A:HOH439 2.2 26.3 1.0
O A:HOH460 2.3 31.6 1.0
O A:HOH413 4.1 14.6 1.0
O A:HOH283 4.5 31.3 1.0
O A:HOH437 4.5 25.2 1.0
O A:HOH358 4.6 15.1 1.0
O A:ALA206 4.6 15.5 1.0
O A:HOH424 4.9 35.0 1.0
CB A:PRO210 4.9 15.5 1.0

Reference:

V.N.Malashkevich, R.Toro, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. CT18 To Be Published.
Page generated: Wed Aug 14 14:00:54 2024

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