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Magnesium in PDB 3h7f: Crystal Structure of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis

Enzymatic activity of Crystal Structure of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis

All present enzymatic activity of Crystal Structure of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis:
2.1.2.1;

Protein crystallography data

The structure of Crystal Structure of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis, PDB code: 3h7f was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 60.730, 102.010, 132.120, 90.00, 90.00, 90.00
R / Rfree (%) 16.5 / 19.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis (pdb code 3h7f). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis, PDB code: 3h7f:

Magnesium binding site 1 out of 1 in 3h7f

Go back to Magnesium Binding Sites List in 3h7f
Magnesium binding site 1 out of 1 in the Crystal Structure of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg427

b:36.6
occ:1.00
O B:HOH980 2.0 36.9 1.0
O B:HOH582 2.0 34.9 1.0
O B:HOH567 2.1 34.8 1.0
O B:HOH981 2.1 33.9 1.0
O B:HOH748 2.1 37.3 1.0
O B:HOH643 2.2 42.1 1.0
O B:HOH962 4.0 50.8 1.0
OE1 B:GLU111 4.3 22.0 1.0
OG B:SER108 4.4 23.3 1.0
OE2 B:GLU111 4.4 29.3 1.0
O B:HOH754 4.5 27.7 1.0
O B:HOH727 4.6 43.5 1.0
O B:LEU106 4.6 20.8 1.0
O B:HOH715 4.6 25.4 1.0
O B:HOH963 4.6 41.7 1.0
CD B:GLU111 4.8 23.7 1.0
CE B:LYS166 4.8 29.8 1.0
O B:HOH487 5.0 27.6 1.0

Reference:

L.Baugh, I.Phan, D.W.Begley, M.C.Clifton, B.Armour, D.M.Dranow, B.M.Taylor, M.M.Muruthi, J.Abendroth, J.W.Fairman, D.Fox, S.H.Dieterich, B.L.Staker, A.S.Gardberg, R.Choi, S.N.Hewitt, A.J.Napuli, J.Myers, L.K.Barrett, Y.Zhang, M.Ferrell, E.Mundt, K.Thompkins, N.Tran, S.Lyons-Abbott, A.Abramov, A.Sekar, D.Serbzhinskiy, D.Lorimer, G.W.Buchko, R.Stacy, L.J.Stewart, T.E.Edwards, W.C.Van Voorhis, P.J.Myler. Increasing the Structural Coverage of Tuberculosis Drug Targets. Tuberculosis (Edinb) V. 95 142 2015.
ISSN: ISSN 1472-9792
PubMed: 25613812
DOI: 10.1016/J.TUBE.2014.12.003
Page generated: Wed Aug 14 15:05:25 2024

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