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Magnesium in PDB 3hko: Crystal Structure of A Cdpk Kinase Domain From Cryptosporidium Parvum, CGD7_40

Protein crystallography data

The structure of Crystal Structure of A Cdpk Kinase Domain From Cryptosporidium Parvum, CGD7_40, PDB code: 3hko was solved by A.K.Wernimont, A.Hutchinson, G.Wasney, M.Vedadi, F.Mackenzie, I.Kozieradzki, D.Cossar, J.Weigelt, A.M.Edwards, C.H.Arrowsmith, C.Bountra, A.Botchkarev, R.Hui, J.D.Artz, M.Amani, Structural Genomicsconsortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.480, 63.045, 84.041, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 24.6

Other elements in 3hko:

The structure of Crystal Structure of A Cdpk Kinase Domain From Cryptosporidium Parvum, CGD7_40 also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Cdpk Kinase Domain From Cryptosporidium Parvum, CGD7_40 (pdb code 3hko). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Cdpk Kinase Domain From Cryptosporidium Parvum, CGD7_40, PDB code: 3hko:

Magnesium binding site 1 out of 1 in 3hko

Go back to Magnesium Binding Sites List in 3hko
Magnesium binding site 1 out of 1 in the Crystal Structure of A Cdpk Kinase Domain From Cryptosporidium Parvum, CGD7_40


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Cdpk Kinase Domain From Cryptosporidium Parvum, CGD7_40 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg330

b:61.1
occ:1.00
O1A A:ANP329 1.9 32.1 0.5
O1B A:ANP329 1.9 33.9 0.5
OD2 A:ASP195 2.1 28.4 1.0
O3G A:ANP329 2.4 35.0 0.5
O2B A:ANP329 2.4 36.1 0.5
PA A:ANP329 2.7 32.9 0.5
PB A:ANP329 3.0 34.1 0.5
O1A A:ANP329 3.1 33.0 0.5
O2A A:ANP329 3.1 32.2 0.5
CG A:ASP195 3.2 25.9 1.0
O2G A:ANP329 3.2 37.5 0.5
O2A A:ANP329 3.3 34.3 0.5
O3A A:ANP329 3.3 33.7 0.5
PA A:ANP329 3.3 34.0 0.5
N3B A:ANP329 3.4 34.5 0.5
O3A A:ANP329 3.4 33.7 0.5
PB A:ANP329 3.4 35.8 0.5
PG A:ANP329 3.5 35.5 0.5
O A:HOH426 3.6 36.9 1.0
O A:HOH375 3.7 33.4 1.0
OD1 A:ASP195 3.9 26.4 1.0
NZ A:LYS39 4.1 30.3 1.0
O5' A:ANP329 4.2 29.7 0.5
CB A:ASP195 4.2 23.4 1.0
N3B A:ANP329 4.3 37.0 0.5
PG A:ANP329 4.4 38.3 0.5
O2B A:ANP329 4.4 33.0 0.5
O A:HOH446 4.4 45.3 1.0
O2G A:ANP329 4.5 36.5 0.5
O1G A:ANP329 4.6 35.9 0.5
OE2 A:GLU60 4.7 33.8 1.0
O A:HOH448 4.7 61.6 1.0
O1B A:ANP329 4.7 35.4 0.5
O A:HOH397 4.7 41.1 1.0
CA A:ASP195 4.9 23.3 1.0
OE1 A:GLU60 4.9 36.7 1.0
O5' A:ANP329 4.9 31.5 0.5
O A:HOH447 5.0 49.6 1.0

Reference:

A.K.Wernimont, A.Hutchinson, G.Wasney, M.Vedadi, F.Mackenzie, I.Kozieradzki, D.Cossar, J.Weigelt, A.M.Edwards, C.H.Arrowsmith, C.Bountra, A.Botchkarev, R.Hui, M.Amani. Crystal Structure of A Cdpk Kinase Domain From Cryptosporidium Parvum, CGD7_40 To Be Published.
Page generated: Wed Aug 14 15:11:54 2024

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