Chemical elements
    Physical Properties
    Chemical Properties
    PDB 101d-1atr
    PDB 1ats-1bup
    PDB 1bvw-1cp8
    PDB 1cqi-1d9d
    PDB 1d9z-1dxe
    PDB 1dxf-1ed9
    PDB 1edr-1f2u
    PDB 1f3f-1fmw
    PDB 1fnm-1g8n
    PDB 1g8t-1gtv
    PDB 1gua-1hnz
    PDB 1hpm-1i95
    PDB 1i96-1iv2
    PDB 1iv3-1jgy
    PDB 1jgz-1k01
    PDB 1k02-1kil
    PDB 1kiz-1l3p
    PDB 1l3r-1lvh
    PDB 1lvk-1mn9
    PDB 1mnd-1n33
    PDB 1n52-1ngg
    PDB 1ngj-1ntb
    PDB 1nu4-1o93
    PDB 1o9t-1ouo
    PDB 1ouq-1pg4
    PDB 1php-1q54
    PDB 1q5h-1qgx
    PDB 1qh1-1r4a
    PDB 1r4x-1rqy
    PDB 1rrf-1s9j
    PDB 1sa0-1svm
    PDB 1svs-1te6
    PDB 1tez-1u0c
    PDB 1u0h-1uhx
    PDB 1uik-1vc9
    PDB 1vcl-1vsd
    PDB 1vst-1wax
    PDB 1wb1-1wzn
    PDB 1x06-1xg4
    PDB 1xhf-1xqa
    PDB 1xr1-1y84
    PDB 1y8a-1yns
    PDB 1yq2-1z0a
    PDB 1z0d-1zc4
    PDB 1zca-1zvq
    PDB 1zvw-2a5l
    PDB 2a5y-2anr
    PDB 2anv-2b8q
    PDB 2b8r-2bku
    PDB 2bm0-2c18
    PDB 2c19-2cic
    PDB 2cie-2d0q
    PDB 2d1k-2dw6
    PDB 2dw7-2egh
    PDB 2eh3-2f6t
    PDB 2f6v-2fmh
    PDB 2fmk-2g3h
    PDB 2g3s-2gl5
    PDB 2gl6-2h7v
    PDB 2h7x-2hne
    PDB 2hny-2i34
    PDB 2i3d-2io7
    PDB 2io8-2j3e
    PDB 2j3q-2jg1
    PDB 2jg2-2nvu
    PDB 2nvx-2oem
    PDB 2ofw-2our
    PDB 2ous-2pcl
    PDB 2pda-2px3
    PDB 2pxi-2q5z
    PDB 2q66-2qlx
    PDB 2qm1-2qwy
    PDB 2qx0-2rdr
    PDB 2rds-2uxq
    PDB 2uxr-2vbn
    PDB 2vbu-2vk8
    PDB 2vkf-2w7x
    PDB 2w83-2wi3
    PDB 2wia-2wzd
    PDB 2wzg-2xcp
    PDB 2xdg-2y0s
    PDB 2y3p-2z4r
    PDB 2z4s-2zjy
    PDB 2zkj-301d
    PDB 302d-3a5k
    PDB 3a5l-3ak8
    PDB 3ak9-3bb3
    PDB 3bb4-3bsu
    PDB 3btx-3c95
    PDB 3c9h-3ckg
    PDB 3clc-3cxc
    PDB 3cxo-3der
    PDB 3des-3du3
    PDB 3du7-3e84
    PDB 3e8m-3eni
    PDB 3eno-3ezw
    PDB 3ezx-3fcs
    PDB 3fct-3fqr
    PDB 3fqt-3g3y
    PDB 3g45-3gj3
    PDB 3gj4-3gve
    PDB 3gvn-3hdz
    PDB 3hfw-3hrz
    PDB 3hs0-3hzt
    PDB 3hzv-3iaf
    PDB 3iak-3ilo
    PDB 3imd-3jvt
    PDB 3jvv-3ka6
    PDB 3ka8-3kkp
    PDB 3kkq-3kxi
    PDB 3kxo-3ldw
    PDB 3lee-3lwm
    PDB 3lwn-3mey
    PDB 3mf4-3n23
    PDB 3n2a-3nkv
    PDB 3nl3-3ocm
    PDB 3ocu-3oiu
    PDB 3oiv-3oye
    PDB 3oyf-3pu9
    PDB 3pwx-3rmj
    PDB 3ro8-3t3p
    PDB 3t5t-3ukd
    PDB 3umm-3v9w
    PDB 3v9x-412d
    PDB 421p-4aov
    PDB 4ap5-4dg1
    PDB 4dh1-4dug
    PDB 4dwd-4en4
    PDB 4en5-4fk1
    PDB 4fkx-8ici
    PDB 8ruc-9rub

Magnesium in the structure of Crystal Structure of Toxoplasma Gondii CDPK3, TGME49_105860 (pdb 3hzt)

The binding sites of Magnesium atom in the structure of Crystal Structure of Toxoplasma Gondii CDPK3, TGME49_105860 (pdb code 3hzt). This binding sites where shown with 5.0 Angstroms radius around Magnesium atom.
The 3hzt structure was solved by A.K.WERNIMONT, J.D.ARTZ, P.FINNERTY, G.WASNEY, A.ALLALI-HASSANI, M.VEDADI, A.BOCHKAREV, C.H.ARROWSMITH, A.M.EDWARDS, C.BOUNTRA, J.WEIGELT, R.HUI, M.AMANI, STRUCTURAL GENOMICS CONSORTIUM (SGC), with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)30.0-2.0
Space groupP1211
a (A)71.051
b (A)43.761
c (A)84.821
alpha (°)90.00
beta (°)96.95
gamma (°)90.00
Rfactor (%)20.7
Rfree (%)25.2

Magnesium Binding Sites:

Magnesium binding site 1 out of 1 in 3hzt

Magnesium binding site 1 out of 1 in 3hzt
Click to enlarge
stereopicture of Magnesium binding site 1 out of 1 in 3hzt
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Magnesium in the PDB 3hzt. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Magnesium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp394, A: Asn395, A: Asn396, A: Gly397, A: Asp398, A: Gly399, A: Gln400, A: Leu401, A: Glu405, A: Tyr447, A: Hoh545, A: Hoh546,

conact list:

AtomAtomDistance (A)
MgCB A:Asp3944.48
MgOD2 A:Asp3944.48
MgC A:Asp3944.58
MgOD1 A:Asp3942.49
MgCG A:Asp3943.64
MgCA A:Asp3944.28
MgN A:Asn3954.65
MgN A:Asn3964.57
MgCB A:Asn3964.86
MgND2 A:Asn3963.99
MgOD1 A:Asn3962.52
MgCG A:Asn3963.56
MgN A:Gly3974.84
MgN A:Asp3984.41
MgCB A:Asp3984.50
MgOD2 A:Asp3982.34
MgOD1 A:Asp3983.60
MgCG A:Asp3983.25
MgCA A:Asp3984.87
MgN A:Gly3994.91
MgO A:Gln4002.73
MgN A:Gln4004.21
MgCB A:Gln4004.68
MgC A:Gln4003.82
MgCA A:Gln4004.44
MgN A:Leu4014.88
MgCD2 A:Leu4014.75
MgOE2 A:Glu4054.91
MgCE2 A:Tyr4474.91
MgCZ A:Tyr4473.83
MgCE1 A:Tyr4474.29
MgOH A:Tyr4472.68
MgO A:Hoh5452.25
MgO A:Hoh5462.88

interactive model:

© Copyright 2008-2012 by