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Magnesium in PDB 3ib5: Crystal Structure of Sex Pheromone Precursor (YP_536235.1) From Lactobacillus Salivarius Subsp. Salivarius UCC118 at 1.35 A Resolution

Protein crystallography data

The structure of Crystal Structure of Sex Pheromone Precursor (YP_536235.1) From Lactobacillus Salivarius Subsp. Salivarius UCC118 at 1.35 A Resolution, PDB code: 3ib5 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.06 / 1.35
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 82.175, 82.175, 108.295, 90.00, 90.00, 90.00
R / Rfree (%) 15 / 18.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Sex Pheromone Precursor (YP_536235.1) From Lactobacillus Salivarius Subsp. Salivarius UCC118 at 1.35 A Resolution (pdb code 3ib5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Sex Pheromone Precursor (YP_536235.1) From Lactobacillus Salivarius Subsp. Salivarius UCC118 at 1.35 A Resolution, PDB code: 3ib5:

Magnesium binding site 1 out of 1 in 3ib5

Go back to Magnesium Binding Sites List in 3ib5
Magnesium binding site 1 out of 1 in the Crystal Structure of Sex Pheromone Precursor (YP_536235.1) From Lactobacillus Salivarius Subsp. Salivarius UCC118 at 1.35 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Sex Pheromone Precursor (YP_536235.1) From Lactobacillus Salivarius Subsp. Salivarius UCC118 at 1.35 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1

b:17.8
occ:1.00
OE1 A:GLU60 2.0 17.6 1.0
O A:HOH564 2.1 18.8 1.0
O A:HOH598 2.1 21.2 1.0
O A:HOH604 2.1 21.8 1.0
O A:HOH541 2.1 17.0 1.0
O A:HOH558 2.2 18.9 1.0
CD A:GLU60 3.2 17.0 1.0
CG A:GLU60 3.9 16.4 1.0
O A:HOH837 4.0 35.7 1.0
O A:HOH809 4.1 32.4 1.0
OE2 A:GLU60 4.1 21.5 1.0
CB A:GLU60 4.2 15.5 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Wed Aug 14 16:01:42 2024

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