Magnesium in PDB 3iev: Crystal Structure of Era in Complex with Mggnp and the 3' End of 16S Rrna

The structure of Crystal Structure of Era in Complex with Mggnp and the 3' End of 16S Rrna, PDB code: 3iev was solved by C.Tu, X.Ji, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	23.72 / 1.90
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	119.600, 71.600, 43.600, 90.00, 101.50, 90.00
R / Rfree (%)	18.3 / 22.7

The binding sites of Magnesium atom in the Crystal Structure of Era in Complex with Mggnp and the 3' End of 16S Rrna (pdb code 3iev). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Era in Complex with Mggnp and the 3' End of 16S Rrna, PDB code: 3iev:

Magnesium binding site 1 out of 1 in the Crystal Structure of Era in Complex with Mggnp and the 3' End of 16S Rrna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Era in Complex with Mggnp and the 3' End of 16S Rrna within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg400 b:10.4 occ:1.00 O2G A:GNP501 1.9 10.8 1.0 O2B A:GNP501 2.0 9.5 1.0 O A:HOH310 2.1 7.4 1.0 OG1 A:THR38 2.1 20.0 1.0 OG A:SER17 2.1 17.1 1.0 O A:HOH306 2.3 8.6 1.0 PG A:GNP501 3.1 10.8 1.0 PB A:GNP501 3.1 10.8 1.0 CB A:THR38 3.2 19.1 1.0 N3B A:GNP501 3.3 9.5 1.0 CB A:SER17 3.3 17.0 1.0 N A:THR38 3.9 19.1 1.0 O1G A:GNP501 3.9 9.7 1.0 N A:SER17 3.9 17.4 1.0 O2A A:GNP501 4.1 10.9 1.0 CA A:THR38 4.1 19.2 1.0 O3A A:GNP501 4.1 10.4 1.0 O1B A:GNP501 4.1 9.6 1.0 OD2 A:ASP58 4.2 23.7 1.0 CA A:SER17 4.2 17.3 1.0 O A:HOH305 4.2 15.2 1.0 O A:ILE30 4.2 20.2 1.0 CG2 A:THR38 4.3 18.8 1.0 O3G A:GNP501 4.3 10.7 1.0 PA A:GNP501 4.4 12.1 1.0 OD1 A:ASP58 4.4 24.0 1.0 O1A A:GNP501 4.6 11.4 1.0 CB A:THR37 4.6 19.5 1.0 O A:THR59 4.7 20.9 1.0 CG A:ASP58 4.7 22.1 1.0 O A:HOH303 4.9 13.8 1.0 CB A:LYS16 4.9 17.7 1.0 C A:THR37 4.9 19.5 1.0 C A:LYS16 5.0 17.8 1.0

C.Tu, X.Zhou, J.E.Tropea, B.P.Austin, D.S.Waugh, D.L.Court, X.Ji. Structure of Era in Complex with the 3' End of 16S Rrna: Implications For Ribosome Biogenesis Proc.Natl.Acad.Sci.Usa V. 106 14843 2009.
ISSN: ISSN 0027-8424
PubMed: 19706445
DOI: 10.1073/PNAS.0904032106