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Magnesium in PDB 3ig2: The Crystal Structure of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis to 2.1A

Enzymatic activity of The Crystal Structure of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis to 2.1A

All present enzymatic activity of The Crystal Structure of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis to 2.1A:
6.1.1.20;

Protein crystallography data

The structure of The Crystal Structure of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis to 2.1A, PDB code: 3ig2 was solved by A.J.Stein, A.Sather, R.Hendricks, L.Keigher, A.Joachimiak, Midwest Centerfor Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.45 / 2.09
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 48.496, 60.335, 78.805, 99.04, 100.37, 105.08
R / Rfree (%) 19.5 / 23.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structure of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis to 2.1A (pdb code 3ig2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structure of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis to 2.1A, PDB code: 3ig2:

Magnesium binding site 1 out of 1 in 3ig2

Go back to Magnesium Binding Sites List in 3ig2
Magnesium binding site 1 out of 1 in the The Crystal Structure of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis to 2.1A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis to 2.1A within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg1

b:28.1
occ:1.00
 SG C:CYS520 2.0 16.2 1.0
O C:HOH249 2.1 28.0 1.0
CB C:CYS520 3.1 13.0 1.0
CA C:CYS520 3.6 13.1 1.0
N C:CYS520 4.4 12.8 1.0
C C:CYS520 4.7 12.7 1.0
O C:CYS520 4.8 13.7 1.0
O C:GLY519 4.9 13.4 1.0
C C:GLY519 5.0 13.4 1.0

Reference:

A.J.Stein, A.Sather, R.Hendricks, L.Keigher, A.Joachimiak. The Crystal Structure of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis to 2.1A To Be Published.
Page generated: Wed Aug 14 16:06:53 2024

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