The binding sites of Magnesium atom in the structure of Structure of ORF157-K57A From Acidianus Filamentous Virus 1 (pdb code 3ild). This binding sites where shown with 5.0 Angstroms radius around Magnesium atom. The 3ild structure was solved by A.GOULET, J.LICHIERE, D.PRANGISHVILI, H.VAN TILBEURGH, C.CAMBILLAU, V.CAMPANACCI, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A) | 22.0-3.1 | Space group | P3121 | a (A) | 64.757 | b (A) | 64.757 | c (A) | 85.743 | alpha (°) | 90.00 | beta (°) | 90.00 | gamma (°) | 120.00 | Rfactor (%) | 27.1 | Rfree (%) | 30.9 |
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Magnesium binding site 1 out of 1 in 3ild
|  Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Magnesium in the PDB 3ild. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Magnesium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: His77, A: Asp79, | conact list:
Atom | Atom | Distance (A) | Mg | NE2 A:His77 | 2.15 | Mg | ND1 A:His77 | 3.88 | Mg | CD2 A:His77 | 3.43 | Mg | CE1 A:His77 | 2.62 | Mg | CG A:His77 | 4.29 | Mg | CB A:Asp79 | 4.21 | Mg | OD2 A:Asp79 | 3.87 | Mg | OD1 A:Asp79 | 2.03 | Mg | CG A:Asp79 | 3.17 | Mg | CA A:Asp79 | 4.86 |
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