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Magnesium in PDB 3ild: Structure of ORF157-K57A From Acidianus Filamentous Virus 1

Protein crystallography data

The structure of Structure of ORF157-K57A From Acidianus Filamentous Virus 1, PDB code: 3ild was solved by A.Goulet, J.Lichiere, D.Prangishvili, H.Van Tilbeurgh, C.Cambillau, V.Campanacci, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.00 / 3.10
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 64.757, 64.757, 85.743, 90.00, 90.00, 120.00
R / Rfree (%) 27.1 / 30.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of ORF157-K57A From Acidianus Filamentous Virus 1 (pdb code 3ild). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of ORF157-K57A From Acidianus Filamentous Virus 1, PDB code: 3ild:

Magnesium binding site 1 out of 1 in 3ild

Go back to Magnesium Binding Sites List in 3ild
Magnesium binding site 1 out of 1 in the Structure of ORF157-K57A From Acidianus Filamentous Virus 1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of ORF157-K57A From Acidianus Filamentous Virus 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg158

b:47.5
occ:0.50
OD1 A:ASP79 2.0 32.4 1.0
NE2 A:HIS77 2.2 28.9 1.0
CE1 A:HIS77 2.6 28.9 1.0
CG A:ASP79 3.2 31.9 1.0
CD2 A:HIS77 3.4 29.0 1.0
OD2 A:ASP79 3.9 32.4 1.0
ND1 A:HIS77 3.9 29.2 1.0
CB A:ASP79 4.2 31.4 1.0
CG A:HIS77 4.3 28.8 1.0
CA A:ASP79 4.9 31.3 1.0

Reference:

A.Goulet, M.Pina, P.Redder, D.Prangishvili, L.Vera, J.Lichiere, N.Leulliot, H.Van Tilbeurgh, M.Ortiz-Lombardia, V.Campanacci, C.Cambillau. ORF157 From the Archaeal Virus Acidianus Filamentous Virus 1 Defines A New Class of Nuclease J.Virol. V. 84 5025 2010.
ISSN: ISSN 0022-538X
PubMed: 20200253
DOI: 10.1128/JVI.01664-09
Page generated: Mon Dec 14 08:17:14 2020

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