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Magnesium in PDB 3ixc: Crystal Structure of Hexapeptide Transferase Family Protein From Anaplasma Phagocytophilum

Protein crystallography data

The structure of Crystal Structure of Hexapeptide Transferase Family Protein From Anaplasma Phagocytophilum, PDB code: 3ixc was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.61
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 92.091, 92.091, 92.091, 90.00, 90.00, 90.00
R / Rfree (%) 17.6 / 19.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Hexapeptide Transferase Family Protein From Anaplasma Phagocytophilum (pdb code 3ixc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Hexapeptide Transferase Family Protein From Anaplasma Phagocytophilum, PDB code: 3ixc:

Magnesium binding site 1 out of 1 in 3ixc

Go back to Magnesium Binding Sites List in 3ixc
Magnesium binding site 1 out of 1 in the Crystal Structure of Hexapeptide Transferase Family Protein From Anaplasma Phagocytophilum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Hexapeptide Transferase Family Protein From Anaplasma Phagocytophilum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg171

b:18.3
occ:1.00
O A:HOH197 2.0 17.0 1.0
ND1 A:HIS67 2.3 10.8 0.5
ND1 A:HIS67 2.3 11.3 0.5
NE2 A:HIS90 2.4 12.8 0.5
NE2 A:HIS90 2.5 11.7 0.5
CE1 A:HIS90 2.9 13.5 0.5
CE1 A:HIS90 3.0 11.8 0.5
CE1 A:HIS67 3.1 9.6 0.5
CE1 A:HIS67 3.2 8.5 0.5
CG A:HIS67 3.3 10.2 0.5
CG A:HIS67 3.4 11.0 0.5
CB A:HIS67 3.5 11.0 0.5
CD2 A:HIS90 3.6 12.7 0.5
CD2 A:HIS90 3.6 12.2 0.5
CB A:HIS67 3.8 11.5 0.5
C A:HIS67 4.1 12.3 0.5
O A:HIS67 4.1 12.6 0.5
ND1 A:HIS90 4.1 12.3 0.5
ND1 A:HIS90 4.1 11.6 0.5
C A:THR68 4.2 15.1 1.0
N A:THR68 4.2 13.0 1.0
NE2 A:HIS67 4.3 11.2 0.5
NE2 A:HIS67 4.4 10.0 0.5
CD2 A:HIS67 4.4 9.5 0.5
CG A:HIS90 4.4 11.9 0.5
CD2 A:HIS67 4.5 10.3 0.5
CA A:THR68 4.5 15.0 1.0
CG A:HIS90 4.5 11.1 0.5
CA A:HIS67 4.6 11.4 0.5
O A:THR68 4.6 16.3 1.0
C A:HIS67 4.6 12.1 0.5
CA A:HIS67 4.7 11.1 0.5
NH1 A:ARG46 4.9 6.6 1.0

Reference:

T.E.Edwards, D.R.Davies, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of Hexapeptide Transferase Family Protein From Anaplasma Phagocytophilum To Be Published.
Page generated: Wed Aug 14 16:21:07 2024

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