Magnesium in PDB 3j6p: Pseudo-Atomic Model of Dynein Microtubule Binding Domain-Tubulin Complex Based on A Cryoem Map

The binding sites of Magnesium atom in the Pseudo-Atomic Model of Dynein Microtubule Binding Domain-Tubulin Complex Based on A Cryoem Map (pdb code 3j6p). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Pseudo-Atomic Model of Dynein Microtubule Binding Domain-Tubulin Complex Based on A Cryoem Map, PDB code: 3j6p:

Magnesium binding site 1 out of 1 in the Pseudo-Atomic Model of Dynein Microtubule Binding Domain-Tubulin Complex Based on A Cryoem Map


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Pseudo-Atomic Model of Dynein Microtubule Binding Domain-Tubulin Complex Based on A Cryoem Map within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:18.6 occ:1.00 O1G A:GTP502 2.4 28.7 1.0 CB A:GLN11 3.1 23.6 1.0 O1B A:GTP502 3.2 41.2 1.0 OE2 A:GLU71 3.3 47.9 1.0 PG A:GTP502 3.7 30.0 1.0 O3B A:GTP502 3.7 35.2 1.0 N A:GLN11 3.8 25.1 1.0 PB A:GTP502 3.8 41.4 1.0 OD2 A:ASP69 3.8 31.7 1.0 CA A:GLN11 3.9 23.8 1.0 OD1 A:ASP69 4.0 33.2 1.0 O3A A:GTP502 4.1 39.2 1.0 CG A:GLN11 4.2 24.7 1.0 CD A:GLN11 4.2 29.2 1.0 CB A:GLU71 4.3 46.4 1.0 CG A:ASP69 4.3 34.8 1.0 CD A:GLU71 4.4 48.7 1.0 OE1 A:GLN11 4.4 33.8 1.0 O2A A:GTP502 4.4 44.5 1.0 CG2 A:VAL74 4.5 61.8 1.0 O2G A:GTP502 4.5 35.0 1.0 CB A:ALA99 4.7 35.5 1.0 NE2 A:GLN11 4.7 29.5 1.0 PA A:GTP502 4.8 41.3 1.0 O3G A:GTP502 4.9 32.1 1.0 C A:GLY10 4.9 28.3 1.0 CG A:GLU71 5.0 49.1 1.0

S.Uchimura, T.Fujii, H.Takazaki, R.Ayukawa, Y.Nishikawa, I.Minoura, Y.Hachikubo, G.Kurisu, K.Sutoh, T.Kon, K.Namba, E.Muto. A Flipped Ion Pair at the Dynein-Microtubule Interface Is Critical For Dynein Motility and Atpase Activation To Be Published.