Magnesium in PDB 3j8a: Structure of the F-Actin-Tropomyosin Complex

The binding sites of Magnesium atom in the Structure of the F-Actin-Tropomyosin Complex (pdb code 3j8a). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Structure of the F-Actin-Tropomyosin Complex, PDB code: 3j8a:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the Structure of the F-Actin-Tropomyosin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the F-Actin-Tropomyosin Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:57.9 occ:1.00 O1B A:ADP402 2.4 74.5 1.0 OE1 A:GLN137 2.6 74.4 1.0 NE2 A:GLN137 2.7 70.2 1.0 CD A:GLN137 2.9 65.5 1.0 PB A:ADP402 3.7 76.0 1.0 O3B A:ADP402 4.1 74.7 1.0 CE1 A:HIS161 4.2 60.7 1.0 CG A:GLN137 4.3 55.5 1.0 NE2 A:HIS161 4.6 58.3 1.0 O A:VAL159 4.6 56.5 1.0 O3A A:ADP402 4.7 57.6 1.0 O2B A:ADP402 4.8 59.1 1.0 OD2 A:ASP154 4.8 64.2 1.0 CB A:GLN137 4.8 54.5 1.0 CA A:GLY13 4.9 68.9 1.0

Magnesium binding site 2 out of 5 in the Structure of the F-Actin-Tropomyosin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the F-Actin-Tropomyosin Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg401 b:63.6 occ:1.00 O3B B:ADP402 2.4 72.7 1.0 NE2 B:GLN137 2.5 68.6 1.0 OE1 B:GLN137 2.7 76.3 1.0 CD B:GLN137 2.9 70.5 1.0 O1B B:ADP402 2.9 76.6 1.0 PB B:ADP402 3.1 76.5 1.0 O2B B:ADP402 4.1 68.7 1.0 O3A B:ADP402 4.4 57.6 1.0 CG B:GLN137 4.4 67.4 1.0 O B:VAL159 4.5 45.6 1.0 CA B:GLY13 4.6 69.5 1.0 NE2 B:HIS161 4.6 55.0 1.0 CA B:GLY156 4.9 59.2 1.0 O B:ASP157 4.9 69.5 1.0 O B:GLY156 4.9 68.7 1.0 N B:GLY156 4.9 49.1 1.0 OD2 B:ASP154 5.0 74.6 1.0

Magnesium binding site 3 out of 5 in the Structure of the F-Actin-Tropomyosin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of the F-Actin-Tropomyosin Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg401 b:45.4 occ:1.00 O1B C:ADP402 2.5 70.8 1.0 OE1 C:GLN137 2.6 79.0 1.0 NE2 C:GLN137 3.0 68.8 1.0 CD C:GLN137 3.1 67.0 1.0 PB C:ADP402 3.8 84.6 1.0 NE2 C:HIS161 4.0 67.4 1.0 O3B C:ADP402 4.1 85.2 1.0 O C:VAL159 4.3 60.1 1.0 CG C:GLN137 4.5 56.8 1.0 CE1 C:HIS161 4.5 69.8 1.0 O3A C:ADP402 4.6 67.2 1.0 CA C:GLY13 4.8 57.4 1.0 O2B C:ADP402 4.9 61.2 1.0 O C:ASP157 4.9 58.2 1.0 CB C:GLN137 4.9 58.1 1.0 O C:GLY156 5.0 70.8 1.0

Magnesium binding site 4 out of 5 in the Structure of the F-Actin-Tropomyosin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of the F-Actin-Tropomyosin Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg401 b:45.1 occ:1.00 O1B D:ADP402 2.3 72.6 1.0 OE1 D:GLN137 2.5 76.8 1.0 NE2 D:GLN137 2.7 62.2 1.0 CD D:GLN137 2.9 65.8 1.0 PB D:ADP402 3.8 83.8 1.0 CG D:GLN137 4.3 58.0 1.0 CE1 D:HIS161 4.3 57.9 1.0 O D:VAL159 4.3 50.3 1.0 O3B D:ADP402 4.5 78.6 1.0 O3A D:ADP402 4.5 57.5 1.0 CA D:GLY13 4.7 66.2 1.0 O2B D:ADP402 4.8 63.1 1.0 CB D:GLN137 4.8 59.6 1.0 NE2 D:HIS161 4.9 59.0 1.0 N D:GLY156 4.9 51.9 1.0 O D:GLY156 4.9 67.0 1.0 CA D:GLY156 5.0 57.2 1.0

Magnesium binding site 5 out of 5 in the Structure of the F-Actin-Tropomyosin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Structure of the F-Actin-Tropomyosin Complex within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg401 b:56.5 occ:1.00 O1B E:ADP402 2.5 73.8 1.0 OE1 E:GLN137 2.6 77.4 1.0 NE2 E:GLN137 2.8 78.2 1.0 CD E:GLN137 3.0 73.4 1.0 NE2 E:HIS161 3.9 72.6 1.0 PB E:ADP402 3.9 73.8 1.0 O E:VAL159 4.2 61.0 1.0 O3B E:ADP402 4.3 74.2 1.0 CG E:GLN137 4.4 54.4 1.0 CE1 E:HIS161 4.5 69.6 1.0 O3A E:ADP402 4.7 55.7 1.0 CB E:GLN137 4.8 55.5 1.0 OD2 E:ASP154 4.8 72.4 1.0 O2B E:ADP402 4.9 60.3 1.0 CD2 E:HIS161 4.9 58.2 1.0

J.Von Der Ecken, M.Muller, W.Lehman, D.J.Manstein, P.A.Penczek, S.Raunser. Structure of the F-Actin--Tropomyosin Complex. Nature 2014.
ISSN: ESSN 1476-4687
PubMed: 25470062
DOI: 10.1038/NATURE14033