Magnesium in PDB 3jao: Ciliary Microtubule Doublet

The binding sites of Magnesium atom in the Ciliary Microtubule Doublet (pdb code 3jao). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Ciliary Microtubule Doublet, PDB code: 3jao:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Ciliary Microtubule Doublet


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ciliary Microtubule Doublet within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:0.0 occ:1.00 O A:HOH604 1.5 0.0 1.0 O A:HOH601 2.1 0.0 1.0 O A:HOH602 2.4 0.0 1.0 O3G A:GTP501 2.4 0.0 1.0 O A:HOH603 2.5 0.0 1.0 O2B A:GTP501 3.2 0.0 1.0 PG A:GTP501 3.7 0.0 1.0 O3B A:GTP501 3.7 0.0 1.0 OD2 A:ASP69 3.7 0.0 1.0 PB A:GTP501 3.8 0.0 1.0 CB A:GLN11 4.0 0.0 1.0 OD1 A:ASP69 4.1 0.0 1.0 OE1 A:GLN11 4.1 0.0 1.0 N A:GLN11 4.1 0.0 1.0 O3A A:GTP501 4.1 0.0 1.0 CG A:ASP69 4.3 0.0 1.0 O1A A:GTP501 4.4 0.0 1.0 O2G A:GTP501 4.5 0.0 1.0 CA A:GLN11 4.6 0.0 1.0 CG2 A:VAL74 4.7 0.0 1.0 OE1 A:GLU71 4.7 0.0 1.0 PA A:GTP501 4.8 0.0 1.0 O1G A:GTP501 4.9 0.0 1.0 CA A:GLY10 4.9 0.0 1.0 C A:GLY10 5.0 0.0 1.0

Magnesium binding site 2 out of 2 in the Ciliary Microtubule Doublet


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Ciliary Microtubule Doublet within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg502 b:0.0 occ:1.00 O B:HOH603 1.6 0.0 1.0 O B:HOH602 2.1 0.0 1.0 O B:HOH604 2.4 0.0 1.0 O1B B:G2P501 2.4 0.0 1.0 O B:HOH601 2.5 0.0 1.0 O3G B:G2P501 2.5 0.0 1.0 PG B:G2P501 3.5 0.0 1.0 PB B:G2P501 3.7 0.0 1.0 O3B B:G2P501 3.8 0.0 1.0 OE2 B:GLU71 3.9 0.0 1.0 O1G B:G2P501 3.9 0.0 1.0 OD1 B:ASP69 4.0 0.0 1.0 C3A B:G2P501 4.2 0.0 1.0 CD B:GLU71 4.2 0.0 1.0 OD2 B:ASP69 4.3 0.0 1.0 CG B:GLU71 4.6 0.0 1.0 CG B:ASP69 4.6 0.0 1.0 O1A B:G2P501 4.6 0.0 1.0 CB B:GLU71 4.7 0.0 1.0 N B:GLN11 4.8 0.0 1.0 CB B:GLN11 4.8 0.0 1.0 OE1 B:GLU71 4.8 0.0 1.0 OE1 B:GLN11 4.9 0.0 1.0 OG1 B:THR74 4.9 0.0 1.0 O2G B:G2P501 4.9 0.0 1.0 PA B:G2P501 4.9 0.0 1.0

A.Maheshwari, J.M.Obbineni, K.H.Bui, K.Shibata, Y.Y.Toyoshima, T.Ishikawa. Alpha- and Beta-Tubulin Lattice of the Axonemal Microtubule Doublet and Binding Proteins Revealed By Single Particle Cryo-Electron Microscopy and Tomography. Structure V. 23 1584 2015.
ISSN: ISSN 0969-2126
PubMed: 26211611
DOI: 10.1016/J.STR.2015.06.017